Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1618 ATGAGCTCCTCAGAGGCCAAGTTTTCACCCTTCAAGTCTAAGAAGTCCCGTATCTGCAATTCAGCCTCCAAATCGGAATCACCAGATCCCGTTTCGTTGAGTTCCAAAACTCCGGAGAAGTCCTCACACCTCTCGCACCGTACTCGAAATCGCGGCGTTGCTCTTTCCATTAGAGAAGTCAGGAAAGTCGCTGAAAGCCTCCAAGATCAGAGGGCCCAGAGGCAAAGAAGTAATGATCGTGCGCAGAATGTGAAGTCCGCTCGGAGGAAGATTGCGCCTTCTTTTGCCGAAGTTTCCCCTCGCAAATCCAAGGCGTCTATGGATGAGCCTGTCAAGATGCCGGAAAAGTATGGTTTGTTTGCTGCTGGTGTTTTGAGCCAGTATGAGATTTTGGGTGAGTTCTTTGACAGCTTGGATAGCTCGATCCGATTGTTGAGTTTGAAAGGTTCATCAACAACTTTCACGAATGTCTGCCCTAAAATTGAATGTTTAACTGATAGGAGATTTACGCATAGTCATCTGGCCCAGTTGAAATACATCTTTCCTGAGGCACTTGTTGTAAAGAAGGTGCTCAGGTTTGATGAAAGAACAAGTTGTATGAAGCCAGACCTCCATCTTTCACTAGATCCCGATTCAAAGTCGCTTTCTGAGGGTGGAAGCGTGTCCTTGCGAAAGATATTTCGCGCACGGTTGAGAGATTTTTATGAATCACATCCTGAGGTTGATGAAATTCCAGAAGAAATGCTGCCTGAGCCATTCAATCGCCGTGATCAAGATCGTCCATTGGAAATGTCGAGAACCACCTCCTCCTTATCTGCTACAGCACCATCAAATGTTGCAGTTGCACCTCATCATCAAGTTACAGAACCTGCGGGCGTGCAAGATAATGCCATGGCAATCAATTCAGAGCCTGCTACGGGAGAAGAAAACTTGTCGGTGCCTGTTAACATGTCAAATGAAGCACATCAGCAACAACCAGCAGGAGCCACTCATATGTCTCAATCTTTTAGGAGGCGCTTTTCTCAGAAATCTGTAAAAGATGAGGCGGATGGTGTGCAAAAAAAGTCATCAGTAGGCTCATTACCTACTCAATCTGTTCCAGTTTCAGAATCAAGCGTGACAAAAAATTCATCAAGTGTAGACACTACTACGTGCCCAACAATATGTGCTTCACCAGCTAATCTCAAATCATCCGGTGCATCAGTTGCCACTCCAAATAAAGCTGTTTCTACCCCATCTAGGTTGATGACCCACACACCTTCATTGCCTCCCCCTAAGAGATGTTACATGAGCCCCGATGACAGCTCTTGCAGCTCACCAAACAAGTTGGTTAGGCGCGCTAGTTTGAAGAAGTCTTTGACCTTTGACACTCCAGTGAAAAATCAGGGGATAGAGGATGAAGCAGATGATGCTGATGGTATCTCACCTGATGACGAAATTTTTGATATTCTCCCCAAGAGTCTTCTCCAATCGATTAAAGAGAAGGAGAGAGTAGCAATGGAGGAAAGAAATCCGGCCATCTCACGAGCAAAAAGACGGCAAAAAATGATTGCCTCCCTCCCTAAGCTATTTAACATGATTCATCTCTTGGTTCATTCAATGAATCGTTCTGTTGTCACCAAAGAGGAGCTTCTGAGCAAGATAATCTCAAACCATTGTGATATTGTTGACCGGAGAGAAGTTGAAGAGCAGCTGAATTTGTTGCTAGAACTAGTGCCCGAATGGATCTCGGAAAAGCTGGCATCTAGTGGAGATCTGCTATTCTGCATAAATAAAATGCAGAGCCCTGAGACCATACGATCACAGCTTGCAGAAGCAAAGTGA 1824 0.4523 MSSSEAKFSPFKSKKSRICNSASKSESPDPVSLSSKTPEKSSHLSHRTRNRGVALSIREVRKVAESLQDQRAQRQRSNDRAQNVKSARRKIAPSFAEVSPRKSKASMDEPVKMPEKYGLFAAGVLSQYEILGEFFDSLDSSIRLLSLKGSSTTFTNVCPKIECLTDRRFTHSHLAQLKYIFPEALVVKKVLRFDERTSCMKPDLHLSLDPDSKSLSEGGSVSLRKIFRARLRDFYESHPEVDEIPEEMLPEPFNRRDQDRPLEMSRTTSSLSATAPSNVAVAPHHQVTEPAGVQDNAMAINSEPATGEENLSVPVNMSNEAHQQQPAGATHMSQSFRRRFSQKSVKDEADGVQKKSSVGSLPTQSVPVSESSVTKNSSSVDTTTCPTICASPANLKSSGASVATPNKAVSTPSRLMTHTPSLPPPKRCYMSPDDSSCSSPNKLVRRASLKKSLTFDTPVKNQGIEDEADDADGISPDDEIFDILPKSLLQSIKEKERVAMEERNPAISRAKRRQKMIASLPKLFNMIHLLVHSMNRSVVTKEELLSKIISNHCDIVDRREVEEQLNLLLELVPEWISEKLASSGDLLFCINKMQSPETIRSQLAEAK 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1618 607 MobiDBLite consensus disorder prediction 1 109 - -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 320 441 - -
Mibi02g1618 607 Pfam DNA replication factor CDT1 like 126 212 IPR014939 -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 40 86 - -
Mibi02g1618 607 CDD Cdt1_c 478 604 IPR032054 -
Mibi02g1618 607 Pfam DNA replication factor Cdt1 C-terminal domain 487 579 IPR032054 -
Mibi02g1618 607 Gene3D - 478 607 IPR038090 -
Mibi02g1618 607 SUPERFAMILY "Winged helix" DNA-binding domain 122 253 IPR036390 -
Mibi02g1618 607 Coils Coil 64 87 - -
Mibi02g1618 607 FunFam CDT1-like protein a chloroplastic 477 607 - -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 356 417 - -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 264 278 - -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 247 263 - -
Mibi02g1618 607 SMART CDT1_2 126 251 IPR014939 -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 320 339 - -
Mibi02g1618 607 MobiDBLite consensus disorder prediction 247 278 - -
Mibi02g1618 607 CDD Cdt1_m 96 263 IPR014939 -
Mibi02g1618 607 PANTHER DNA REPLICATION FACTOR CDT1 15 607 IPR045173 GO:0003677|GO:0030174|GO:0071163
Mibi02g1618 607 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1618 Mibi-ChrMibi02 16330951 16333854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1618 10 605 Core DNA Replication Machinery Family AT2G31270 42.233 1.57e-120 367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1618 02 16330951 16333854 Mibi06g2411 06 44350179 44356338 CCT
Mibi02g1618 02 16330951 16333854 Mibi02g1618 02 16330951 16333854 ECH