Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1606 ATGTCTTGCCCGTCCTATCAGCAGCCATGCCCAGATTGGGAGTTCTGGCAGGAGACTTCTGATCCATTCTTGCTCTCTTCTTCATCAAGCGACCAACTTCATGGAGACCCTTTCCATGATTATCTCTGCTTCGATATGGTTGAAAAGGAGGCAAATCAAGCACCGGTGAGTTGGGAAGGGATGGGAGGAAAGAATAGAGTGGAGGAAAAAACATACATAGGGGTAAGGAAGAGGCCTTGGGGGAAATTTGCAGCAGAGATAAGAGACACGACAAGGAATGGTATCAGAGTCTGGTTGGGGACTTTTGAGAGTGCAGAGGAGGCTGCTCTGGCTTATGACCAAGCTGCATTCACCATGAGAGGCTCCAACGCTGTTCTTAATTTTCCAGTTCAAAAGGTGAAAGACTCTCTCCAACATATCATGTATGGCTGCCGCAAGGGGTGTTCACCTGCTTTGGCACTCAAAGAGAGACACTACATCCAAAGAAAACTGTCTTCCAAGGCTAAGAGAGACAAAGCCAAACAGAAATCAGAGGTGTTGGTGCTAGAGGACCTGGGTGTTGAATATCTGGAGCAACTTCTCAGCACATGTGATCGAACTACAAGCTAG 609 0.4745 MSCPSYQQPCPDWEFWQETSDPFLLSSSSSDQLHGDPFHDYLCFDMVEKEANQAPVSWEGMGGKNRVEEKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESAEEAALAYDQAAFTMRGSNAVLNFPVQKVKDSLQHIMYGCRKGCSPALALKERHYIQRKLSSKAKRDKAKQKSEVLVLEDLGVEYLEQLLSTCDRTTS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1606 202 ProSiteProfiles AP2/ERF domain profile. 71 129 IPR001471 GO:0003700|GO:0006355
Mibi02g1606 202 FunFam Ethylene-responsive transcription factor 2 70 131 - -
Mibi02g1606 202 Pfam AP2 domain 72 121 IPR001471 GO:0003700|GO:0006355
Mibi02g1606 202 Gene3D AP2/ERF domain 70 131 IPR036955 GO:0003700|GO:0006355
Mibi02g1606 202 SMART rav1_2 71 135 IPR001471 GO:0003700|GO:0006355
Mibi02g1606 202 CDD AP2 72 131 IPR001471 GO:0003700|GO:0006355
Mibi02g1606 202 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Mibi02g1606 202 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Mibi02g1606 202 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
Mibi02g1606 202 PANTHER DNA-BINDING DOMAIN 58 195 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1606 Mibi-ChrMibi02 16245071 16245679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1606 65 200 AP2-EREBP Transcription Factor Family AT3G23240 57.447 6.97e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1606 AP2 9.5e-14 CL0081