Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1605 ATGTCTTGTCCGTCAACCCAGAACCCATCATCATGCCCAGATTGGGATTTTTGGCATGAGACATTTGATCCTTTCATGATCTCTTCATCATCAAGCGATCAAGTTCAAGGAGACCCTTTTCATGATTATCTCTGCTTCGATATGGTTGAAAAGGAGGCAAATCAAGCCCGAGAGATGTGGGAAGCCATGGAAGCAAAGAAGAGAGTGGAGGAAAAAGCATACATAGGGGTGAGGAAGAGGCCTTGGGGAAAATATGCAGCAGAGATAAGAGACACAACAAGGAATGGTATCAGAGTCTGGCTTGGGACGTTCGAGAGTGCAGAGGAGGCTGCTTTGGCTTATGACCAAGCTGCATTCACCATGAGAGGCTCCAATGCTGTTCTTAATTTTCCAGTCCAAAAGGTGAAAGACTCTCTCCAACACATCAATATGTATGGTTGCAGAAAGGGGTGTTCCCCTGCTTTAGCACTCAAAGAGAGACACTACATCCAAAGAAAACTGTCTTCCAAGGCTAAGAAAAGAAAAGCCAAACAGAAATCAGAGGTGGTGGTGCTAGAAGACTTGGGTGTTGAATATCTTGAGCAACTTCTCTCCATATGTGATCAAACTACTACAAGCTAG 621 0.4461 MSCPSTQNPSSCPDWDFWHETFDPFMISSSSSDQVQGDPFHDYLCFDMVEKEANQAREMWEAMEAKKRVEEKAYIGVRKRPWGKYAAEIRDTTRNGIRVWLGTFESAEEAALAYDQAAFTMRGSNAVLNFPVQKVKDSLQHINMYGCRKGCSPALALKERHYIQRKLSSKAKKRKAKQKSEVVVLEDLGVEYLEQLLSICDQTTTS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1605 206 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Mibi02g1605 206 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Mibi02g1605 206 FunFam Ethylene-responsive transcription factor 2 72 133 - -
Mibi02g1605 206 Gene3D AP2/ERF domain 72 133 IPR036955 GO:0003700|GO:0006355
Mibi02g1605 206 CDD AP2 74 133 IPR001471 GO:0003700|GO:0006355
Mibi02g1605 206 Pfam AP2 domain 74 123 IPR001471 GO:0003700|GO:0006355
Mibi02g1605 206 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Mibi02g1605 206 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Mibi02g1605 206 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Mibi02g1605 206 PANTHER DNA-BINDING DOMAIN 55 198 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1605 Mibi-ChrMibi02 16220755 16221375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1605 68 205 AP2-EREBP Transcription Factor Family AT3G23240 57.343 7.63e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1605 AP2 9.5e-14 CL0081