Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1604 ATGTCTTCGTCGTCAAAGCAAAACCCATCATTATGCACAGATTGGGATTTTTGGCATGAGACATTTGATCCTTTCTTGGCCTCTTCATCAAGCAATCAGCTTCATGGAGATCCTTCCCATGATTATCTCTGCTTCGATATGATCGATAAGGAGGCGAATCAAGCACCAGCAAGTTGGGAAGCCATGGAAGGAAAGAAGAGAGTGGAGGAAAAAACATACATAGGGGTGAGAAAGAGGCCTTGGGGAAAATTTGCTGCAGAAATAAGAGACACGACAAGGAATGGCATCAGAGTCTGGCTTGGGACGTTTGAGAGTGCAGAGGAGGCTGCTTTGGCTTATGACCAAGCTGCGTTCACCATGAGGGGCTCCAATGCTGTTCTTAATTTTCCAGTTCAAAAGGTGAAAGACTCTCTCCAACACATCAATATGTATGGTTGCCGAAAGGGGTGTTCCCCTGCATTAGCACTCAAAGAGAGACACTACATCCAAAGAAAACTGTCTTCCAAGGCTAAGAAAAGAGAAGCCAAACAGAAATCAGAGGTGGTGGTGCTAGAAGACTTGGGTGTTGAATATCTTGAGCAACTTCTAGCCATATGTGATCAAACTAGTACAAGCTAG 618 0.4466 MSSSSKQNPSLCTDWDFWHETFDPFLASSSSNQLHGDPSHDYLCFDMIDKEANQAPASWEAMEGKKRVEEKTYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFESAEEAALAYDQAAFTMRGSNAVLNFPVQKVKDSLQHINMYGCRKGCSPALALKERHYIQRKLSSKAKKREAKQKSEVVVLEDLGVEYLEQLLAICDQTSTS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1604 205 CDD AP2 73 132 IPR001471 GO:0003700|GO:0006355
Mibi02g1604 205 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Mibi02g1604 205 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Mibi02g1604 205 PANTHER DNA-BINDING DOMAIN 56 197 IPR044808 GO:0003700|GO:0009873
Mibi02g1604 205 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Mibi02g1604 205 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Mibi02g1604 205 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Mibi02g1604 205 FunFam Ethylene-responsive transcription factor 2 71 132 - -
Mibi02g1604 205 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
Mibi02g1604 205 SUPERFAMILY DNA-binding domain 72 131 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1604 Mibi-ChrMibi02 16153200 16153817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1604 67 204 AP2-EREBP Transcription Factor Family AT3G23240 58.042 3.56e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1604 AP2 9.8e-14 CL0081