Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1602 ATGGATTCAGATTCCTTCTTCTTCCAATACCCACAACCTCACTGCTACCCTGTAGATTCCCCTGCTTCAGGATCATCATCATCAATCTCCTCCTGGGATGACCTTTTGCTCTTCAACAACCACGACAACTTCTACTTCCCACAAGATCATACCATGTCTTTCGATGTAGTAGCCAATGATTTATCATCATCATCATCATATGAATCCAATTCTTCTTCAGGCTTGGAGGCAGCACAAGAAGTGTCCTCCGGCTTCAAAGTGGAGGAGAAAGAAGAGAAGAGGGTGGTGTACAGAGGAGTGAGGAGGAGGCCATGGGGGAAATTCGCCGCGGAGATAAGGGACTCAACAAGAAAAGGGGTCAGAGTTTGGATTGGAACATTTGATACGGCAGAGGAAGCAGCTTTGGCTTATGATCAGGCTGCATTGTCCACAAGAGGCTCTCAGGCTGTTCTCAATTTCCCTGAGAAAATTGTGAGGGAGTCATTGAGGAAGATGCCAAACAAGACATGGCAGCAGGATTCCTCTCCTGTTTTGGCACTCAAGAAGAAACACACCTCCACACGACAGTCTAAATGCAAGAGACCAAATCCCAAATCCCAAATTCATTCTCCTCATCCTCATGAGGGTGTGCTGGTGTTGGAGGATTTGGGGGCTGACTTTCTTGACCAACTTTTGACCCTCACTTGTCGTTGA 693 0.469 MDSDSFFFQYPQPHCYPVDSPASGSSSSISSWDDLLLFNNHDNFYFPQDHTMSFDVVANDLSSSSSYESNSSSGLEAAQEVSSGFKVEEKEEKRVVYRGVRRRPWGKFAAEIRDSTRKGVRVWIGTFDTAEEAALAYDQAALSTRGSQAVLNFPEKIVRESLRKMPNKTWQQDSSPVLALKKKHTSTRQSKCKRPNPKSQIHSPHPHEGVLVLEDLGADFLDQLLTLTCR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1602 230 CDD AP2 104 155 IPR001471 GO:0003700|GO:0006355
Mibi02g1602 230 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Mibi02g1602 230 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Mibi02g1602 230 PANTHER DNA-BINDING DOMAIN 68 222 IPR044808 GO:0003700|GO:0009873
Mibi02g1602 230 SUPERFAMILY DNA-binding domain 96 155 IPR016177 GO:0003677
Mibi02g1602 230 Pfam AP2 domain 96 146 IPR001471 GO:0003700|GO:0006355
Mibi02g1602 230 SMART rav1_2 96 160 IPR001471 GO:0003700|GO:0006355
Mibi02g1602 230 MobiDBLite consensus disorder prediction 168 205 - -
Mibi02g1602 230 FunFam Ethylene-responsive transcription factor 2 95 155 - -
Mibi02g1602 230 Gene3D AP2/ERF domain 96 156 IPR036955 GO:0003700|GO:0006355
Mibi02g1602 230 ProSiteProfiles AP2/ERF domain profile. 96 154 IPR001471 GO:0003700|GO:0006355
Mibi02g1602 230 MobiDBLite consensus disorder prediction 168 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1602 Mibi-ChrMibi02 16052840 16053532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1602 79 229 AP2-EREBP Transcription Factor Family AT2G31230 45.055 2.96e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1602 AP2 4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1602 02 16052840 16053532 Mibi06g2406 06 44281476 44282276 CCT
Mibi02g1602 02 16052840 16053532 Mibi02g1602 02 16052840 16053532 ECH