LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g1601	ATGTCTTCGCCGTCAACGAAGAAGCCATCATCATGCCCAGATTGGGATTTTTGGCATGAAACATTTGATCCCTTCCTGGCCTCTTCATCATCATCAAGCGATGATCAACTTCATGGACACCCTTTCCATGATTATCTCTGCTTTGACATGATCGAAAGGGAGGCGGCGAATCAAGTGCCGGCGAGTTGGGAAGCCATGGAAGGAAGGAAGATAGTGGAGGAAAAAACATACATAGGGGTGAGGAAGAGGCCTTGGGGAAAATTTGCTGCAGAGATAAGAGACACTACAAGGAATGGTGTCAGAGTCTGGCTGGGGACTTTCGAGAGTGCAGAGGAGGCTGCTTTGGCCTATGACCAAGCTGCATTCACCATGAGAGGCTCCAACGCTGTTCTTAATTTTCCAGTTCAGAAGGTGAAAGACTCTCTCCAACACATCAATATGTATGGTTGCAACAAAGGGTGTTCACCTGCTTTAGCACTCAAAGAGAGACACTACCTCCAAAGGAAACTGTCTTCCAAGGCTAAGAAAGGCAAATCCAAACAGCAATCAGATGTGGTGGTGCTAGAAGACTTGGGTGTTGAATATCTGGAGCAACTTCTCGCCATATCTGATCAAACTACTTCAAGTTAG	630	0.4651	MSSPSTKKPSSCPDWDFWHETFDPFLASSSSSSDDQLHGHPFHDYLCFDMIEREAANQVPASWEAMEGRKIVEEKTYIGVRKRPWGKFAAEIRDTTRNGVRVWLGTFESAEEAALAYDQAAFTMRGSNAVLNFPVQKVKDSLQHINMYGCNKGCSPALALKERHYLQRKLSSKAKKGKSKQQSDVVVLEDLGVEYLEQLLAISDQTTSS	209

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mibi02g1601	209	CDD	AP2	77	136	IPR001471	GO:0003700\|GO:0006355
Mibi02g1601	209	SUPERFAMILY	DNA-binding domain	76	135	IPR016177	GO:0003677
Mibi02g1601	209	PANTHER	DNA-BINDING DOMAIN	55	201	IPR044808	GO:0003700\|GO:0009873
Mibi02g1601	209	SMART	rav1_2	76	140	IPR001471	GO:0003700\|GO:0006355
Mibi02g1601	209	FunFam	Ethylene-responsive transcription factor 2	75	136	-	-
Mibi02g1601	209	Gene3D	AP2/ERF domain	75	136	IPR036955	GO:0003700\|GO:0006355
Mibi02g1601	209	Pfam	AP2 domain	77	126	IPR001471	GO:0003700\|GO:0006355
Mibi02g1601	209	PRINTS	Ethylene responsive element binding protein signature	100	116	IPR001471	GO:0003700\|GO:0006355
Mibi02g1601	209	PRINTS	Ethylene responsive element binding protein signature	77	88	IPR001471	GO:0003700\|GO:0006355
Mibi02g1601	209	ProSiteProfiles	AP2/ERF domain profile.	76	134	IPR001471	GO:0003700\|GO:0006355

Showing 1 to 10 of 10 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g1601	Mibi-ChrMibi02	16038300	16038929	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g1601	74	206	AP2-EREBP Transcription Factor Family	AT3G23240	59.420	1.05e-54	172

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Mibi02g1601		AP2	8.8e-14	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi02g1601	02	16038300	16038929	Mibi06g2405	06	44271497	44273089	CCT
	Mibi02g1601	02	16038300	16038929	Mibi02g1601	02	16038300	16038929	ECH

Showing 1 to 2 of 2 entries