Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1600 ATGGATTCAGATTCCTTCTTCTTCCAATACCCACAACCTCATTGCTACCCTCCAGATTCATCATCAACAACAATCTCCTCCTGGGATGACCTTTTGCTCTTCAACAACCACGACAACTTCTACTTCCCACAAGATCATACCATGTCTTTCGATGTAGTAGCCAATGATTTATCATCATCATCATCATATGAATCCAATTCTTCTTCAGGCTTGGAGGCAGCACAAGAAGTGTCCTCCGGCTTCAAAGTGGAGGAGAAAGAAGAGAAGAGGGTGGTGTACAGAGGAGTGAGGAGGAGGCCATGGGGGAAATTCGCCGCGGAGATAAGGGACTCAACAAGAAAAGGGGTCAGAGTTTGGATTGGAACATTTGATACGGCAGAGGAAGCAGCTTTGGCTTATGATCAGGCTGCATTGTCCACAAGAGGCTCTCAGGCTGTTCTGAATTTCCCTGAGGAAATTGTGAGGGAGTCACTGAGGAAGATGCCAAACAAGACATGGCAGCAAGATTCATCTCCTGTTTTGGCACTCAAGAAGAAACACACCTCCACACGGAAGTCCAAGTGCAAGAGACCAAATCCCAAATCCCAAATCCATTCTCCTCATCCTCATGATGAGGGTGTTTTGGTGTTGGAGGATCTGGGGGCTGACTTTCTTGACCAACTTTTGACCCTCACTTGTCATTGA 684 0.4664 MDSDSFFFQYPQPHCYPPDSSSTTISSWDDLLLFNNHDNFYFPQDHTMSFDVVANDLSSSSSYESNSSSGLEAAQEVSSGFKVEEKEEKRVVYRGVRRRPWGKFAAEIRDSTRKGVRVWIGTFDTAEEAALAYDQAALSTRGSQAVLNFPEEIVRESLRKMPNKTWQQDSSPVLALKKKHTSTRKSKCKRPNPKSQIHSPHPHDEGVLVLEDLGADFLDQLLTLTCH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1600 227 CDD AP2 100 151 IPR001471 GO:0003700|GO:0006355
Mibi02g1600 227 Pfam AP2 domain 92 142 IPR001471 GO:0003700|GO:0006355
Mibi02g1600 227 Gene3D AP2/ERF domain 92 152 IPR036955 GO:0003700|GO:0006355
Mibi02g1600 227 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Mibi02g1600 227 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Mibi02g1600 227 PANTHER DNA-BINDING DOMAIN 64 219 IPR044808 GO:0003700|GO:0009873
Mibi02g1600 227 MobiDBLite consensus disorder prediction 178 196 - -
Mibi02g1600 227 MobiDBLite consensus disorder prediction 162 203 - -
Mibi02g1600 227 ProSiteProfiles AP2/ERF domain profile. 92 150 IPR001471 GO:0003700|GO:0006355
Mibi02g1600 227 SUPERFAMILY DNA-binding domain 92 151 IPR016177 GO:0003677
Mibi02g1600 227 SMART rav1_2 92 156 IPR001471 GO:0003700|GO:0006355
Mibi02g1600 227 MobiDBLite consensus disorder prediction 162 177 - -
Mibi02g1600 227 FunFam Ethylene-responsive transcription factor 2 91 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1600 Mibi-ChrMibi02 16024967 16025650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1600 75 226 AP2-EREBP Transcription Factor Family AT2G31230 47.253 1.16e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1600 AP2 3.9e-15 CL0081