Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1596 ATGGGAAGAGCTCCTTGCTGCCAGAAAGTGGGATTGAAGAGAGGTCCTTGGACTGCAGAAGAAGATCAAATTTTGATCAATCATGTCAATAAATATGGCCATAGCAATTGGCGTGCTCTCCCCAAATTAGCTGGACTTCTAAGGTGTGGGAAAAGTTGCAGACTCCGATGGATCAATTATTTGAAACCAGACATAAAACGAGGAAACTTCACCCAAGAAGAAGAAGATACCATCATCAAGCTTCATGAAATGTTGGGAAACAGATGGTCAGCAATAGCAGCGAAGTTACCAGGCCGCACAGACAACGAAATAAAGAATGTATGGCACACACACTTAAAGAAGAGGCTTCCACATAACCAACACAACCATCCCCAACCAAAACGAAAACCAAATAAACAACAACAACAACAACAACAAAACAATGTGACAACCGACGAGAAAAGACCACTTTCTCCTTCACATTCGAGTGATGTATCCACCCTCACCACCACAAACAACCATAGTAGTCCGGCAAGTAACGTCAACATTACCGATGACGACATGTCCATGAACATTAATGTTGATTCTCAGGAGTCACTTGCATTGGATGATGATTTCTGGTCGGAAGTACTTTCTGCTGATAACTCCAACGAGGCTAATGATTATATTCCGGTGGCCGCAGGCGGCGGTGGGGTGGAGTCAGAGTTTCAGTTTTTGTTGTCTCAATTAGATGAGGCACAAGTAGAAGAAGATCATGTGGGTTCGTTAAGTATGGGGGAGGATATGGATTTTTGGTTTGATGTTTACAATAGAGCTGAGGAATTCACGGAGCTACCACAGTTATGA 825 0.4315 MGRAPCCQKVGLKRGPWTAEEDQILINHVNKYGHSNWRALPKLAGLLRCGKSCRLRWINYLKPDIKRGNFTQEEEDTIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLPHNQHNHPQPKRKPNKQQQQQQQNNVTTDEKRPLSPSHSSDVSTLTTTNNHSSPASNVNITDDDMSMNINVDSQESLALDDDFWSEVLSADNSNEANDYIPVAAGGGGVESEFQFLLSQLDEAQVEEDHVGSLSMGEDMDFWFDVYNRAEEFTELPQL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1596 274 MobiDBLite consensus disorder prediction 129 180 - -
Mibi02g1596 274 FunFam Transcription factor MYB15 68 141 - -
Mibi02g1596 274 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi02g1596 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi02g1596 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi02g1596 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 213 - -
Mibi02g1596 274 MobiDBLite consensus disorder prediction 115 180 - -
Mibi02g1596 274 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi02g1596 274 SMART sant 13 63 IPR001005 -
Mibi02g1596 274 SMART sant 66 114 IPR001005 -
Mibi02g1596 274 FunFam MYB-related transcription factor 13 66 - -
Mibi02g1596 274 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g1596 274 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi02g1596 274 CDD SANT 16 61 IPR001005 -
Mibi02g1596 274 Gene3D - 68 145 - -
Mibi02g1596 274 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g1596 274 CDD SANT 69 112 IPR001005 -
Mibi02g1596 274 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1596 Mibi-ChrMibi02 15991592 15993063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1596 1 274 MYB Transcription Factor Family AT2G31180 50.542 3.41e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g1596 Myb_DNA-binding 3.3e-15 CL0123