Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1585 ATGGATTCTTCATCTTGTCTCATCGTTTTCTTCGTCACTCTTCTTTCTTGCCGATTTGACCCCTTCACTGTAAGGGTGACAACGCCTCCATCTTCGCCTGGAAGGGCGAGACCCTCCAAGAGTACTGGTGGTGCACAGAGCTCGCCCTTGATTGTAGGTAGGACACTGGAGGAGGCGGTTTCAGGGACTCTGGATCCTTCTCCTCCTCCTCCTTCGACATCTGAGATACCACAAGAAACTAGGGTTTCATTCATTCTTCTTGCTGGACCTGTGCAGGACCAGAGGGCGAAAGCTCACAAAGAATCTTTCTTCTTCTACGCAGTAATCATTTTCAGTTTGGACTTGTTCACTTGCTCATTGGGCAGGTGTTTAGTTGAGGATGCAGAAGCTAGGGGAGTCTTAGAAGTCCCCCCTGGTTTTAGATCTCTTACTTCTTTCACACTTGAAAAGGTTGCGAAGACTGATAAATCTGAATGTGATCCAATTTGCACGGAGAGTATATTGAAGCTAAATGACACTGCTGCATTTAAGGCTTTTCTGAAGCATCGTCCATGGATACTTTTTGATCAAAGTGACCATGACCTTGAGAAATCCGACACACAGCATTTTCCTCTGGGTTTTTCTTCAAATGCTTGTCGTCCAAAAGGGGTTACTCTTGGTTGTCCAGACTGTAGTGACTGTCTAAAGGTAGCCACAAGGTGGTGCCCCGAGGATGCAAGAAGAGATATTCTTGATGAAGCTCAAATTTTCCGCCCAACAGAGGAGGAATTCAAAGACACTTATGAATATATTGCAAGCATACGTTCCAAAGCAGAGCCTTATGGAATTTGTCGTATTATTCCTCCTCCTACCTGGCAACCGCAATGTCTTCTCAAGGAAAAAACCATATGGGAAAACTCTCAATTTGTTACTCAGATCCAGCGAATTGATGGACTTCAAGTTCAGTGCCAGCAAGAAGCTAGGGACAACTCTTCCAAAAATGCAGAGACCAAGATCAGAAGACGTCTAGTAGTAGCTTTGGACTCTCAGCCTGGCAATGAAAACCAGCATGATGTTGAAGACTTTGAGTCTAATCGTGGCCCTACCTTCAGTCTCAGTACATTTAAGAAATTTGCTGATGATTTCAAGGCCAAGTACTTCAACTGTGACAATAGTGTTGTGGGTTCTGATGAAAAGTGGGAGCCATCTGTGGAGAATATTGAGGGTGAGTATGGACGGATTATTCAAAATCCAACTCATGAAATTGAGGTGTTTTTGGGGAACGACTTGGGAGCTGGAGTTTTAAGCAGTGGATTTCCTATGATGTCTGATCCTGTGGAGTCACTTAAATATGCTGAATGTATGAGATCTGGTTGGAACTTAAATAATATGCTCACACAATCCGGTTCTCTTCTTTCATTTGAAAGCTCTGAGGTTTCCTGCAAATTCACCCCTCGGGTTCGTGTTGGAATGTGTTTTTCTTCATTCAGTTGGGAAGTAGAAGAGCACCACTTGTACTCATTGTGTTACATGCATGTTGGTGAGCCAAAAGTTTGGTATGGCATTCCGGGAAGATTTGCTGCTGACTTTGAAACAGTGAGGAAGAAGCATCTCCCCGTTTCGTCTGCAGAGCAGCCTGTTTCGTCTGCAGAGCAGCCTGACTCGCATGACAATCTGTTATCCTCCACCGTATTGAAGTCAGAGGGTATACCAGTATATCGCTGTGTTCAATATCCCGGGGAGTTTGTTCTTGTCTTCCCAGCAGCATACCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAAGCAGTCAGTTTTGCTCCTCTTGATTGGCTGCTTCATGGACAGAAAGTTGTAGAGTTATATTGTGAAAGAAGGAGAAGGACTTCAATTTCATACGATAAGCTGTTGCTTGGGGCAGCAAGGAAAGCTGTCAGGGCACAATTTGAGATTGAACTCTGTTTGAGGGGTACCCCAGATAATTTAAAATGGAAAGATGCATGTGGAAAGAATGGGAAATTAACAAAAGCTTTTGATTTACGGAGAAAGAGTGAAAGTTCAAAGAGGAAATTCCTTTGCGCTTCTCTGAAATCACGGAGGATGGAAAAGGATTTTGATGCCACTTGCAAAAGAGAATGTTGCATATGTCTGCGTGACTTACACTTATCTGCCATAGGTTGTCCATGTTCAACCGACAGATTTGCATGCCTTAATCATGCAAAGCAGCTTTGCTCCTGCCCTTGGGCTGATAGATTCGTCCTCAACAGATATGAAATGAGCGAGTTAGATACACTTCATCACGCTTTGGAGGGAAAAGCAAGTCTTATCCATAAATGGGCCAAATCCGATCTTGGATTAAGTGTGCATTCCTTTGCCTCCAAAAGAAACACGACTGGTTTGCCATCTAGTCCGCGTGGGAAAGCATTTTTGAATTCGCTGAAACGTAGAAGAGAAGCAATCGAGTCCGAAGGTACGGGCACTGCTAGTATCTCTTCCAGCATTGAGGCAAAATCAAAGCCACCTTTACCTGAATGGAAGGCGCAACAGGAAACATTAGGCCACCAATCTACAGCAAGACACATTAAGAATGGGGTTGACTCTGCTGCTGCCATTAAACCTACTCCCAAGTCACGCAAGGTTCAGTCATCAACTCCATATTTGACTAAAAATGACCCAAAAGTGGCCCGGGATTTTCTTGGTCTTAATTTAACGTCGGGTTGTATGGCGCTGCTGCCTGAGATCAGGGCACATGATGTCTCTTCAGATAGTTCATCTTCATCAGAATCCGATGATTCCACTTAA 2781 0.4405 MDSSSCLIVFFVTLLSCRFDPFTVRVTTPPSSPGRARPSKSTGGAQSSPLIVGRTLEEAVSGTLDPSPPPPSTSEIPQETRVSFILLAGPVQDQRAKAHKESFFFYAVIIFSLDLFTCSLGRCLVEDAEARGVLEVPPGFRSLTSFTLEKVAKTDKSECDPICTESILKLNDTAAFKAFLKHRPWILFDQSDHDLEKSDTQHFPLGFSSNACRPKGVTLGCPDCSDCLKVATRWCPEDARRDILDEAQIFRPTEEEFKDTYEYIASIRSKAEPYGICRIIPPPTWQPQCLLKEKTIWENSQFVTQIQRIDGLQVQCQQEARDNSSKNAETKIRRRLVVALDSQPGNENQHDVEDFESNRGPTFSLSTFKKFADDFKAKYFNCDNSVVGSDEKWEPSVENIEGEYGRIIQNPTHEIEVFLGNDLGAGVLSSGFPMMSDPVESLKYAECMRSGWNLNNMLTQSGSLLSFESSEVSCKFTPRVRVGMCFSSFSWEVEEHHLYSLCYMHVGEPKVWYGIPGRFAADFETVRKKHLPVSSAEQPVSSAEQPDSHDNLLSSTVLKSEGIPVYRCVQYPGEFVLVFPAAYHSGFDCGFNCSEAVSFAPLDWLLHGQKVVELYCERRRRTSISYDKLLLGAARKAVRAQFEIELCLRGTPDNLKWKDACGKNGKLTKAFDLRRKSESSKRKFLCASLKSRRMEKDFDATCKRECCICLRDLHLSAIGCPCSTDRFACLNHAKQLCSCPWADRFVLNRYEMSELDTLHHALEGKASLIHKWAKSDLGLSVHSFASKRNTTGLPSSPRGKAFLNSLKRRREAIESEGTGTASISSSIEAKSKPPLPEWKAQQETLGHQSTARHIKNGVDSAAAIKPTPKSRKVQSSTPYLTKNDPKVARDFLGLNLTSGCMALLPEIRAHDVSSDSSSSSESDDST 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1585 926 ProSiteProfiles JmjC domain profile. 446 616 IPR003347 -
Mibi02g1585 926 Pfam C5HC2 zinc finger 706 758 IPR004198 -
Mibi02g1585 926 Pfam JmjC domain, hydroxylase 481 599 IPR003347 -
Mibi02g1585 926 Gene3D Cupin 232 600 - -
Mibi02g1585 926 PANTHER LYSINE-SPECIFIC DEMETHYLASE 242 865 - -
Mibi02g1585 926 MobiDBLite consensus disorder prediction 27 49 - -
Mibi02g1585 926 SUPERFAMILY Clavaminate synthase-like 363 638 - -
Mibi02g1585 926 SMART JmjN_1 246 287 IPR003349 -
Mibi02g1585 926 ProSiteProfiles JmjN domain profile. 247 288 IPR003349 -
Mibi02g1585 926 Pfam jmjN domain 249 281 IPR003349 -
Mibi02g1585 926 SMART cupin_9 449 616 IPR003347 -
Mibi02g1585 926 MobiDBLite consensus disorder prediction 813 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1585 Mibi-ChrMibi02 15886269 15894271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1585 123 786 JUMONJI Transcription Factor Family AT1G08620 44.808 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi02g1585 JmjC 4e-32 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1585 02 15886269 15894271 Mibi02g1585 02 15886269 15894271 ECH