Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1584 ATGGGTTTGAGAGACATCGGGGCTTCACTACCACCTGGGTTTCGATTTTATCCGAGTGATGAAGAATTAGTGTGCCATTATCTCTACAAAAAGATCTCAAACGAGGAGGCTCTCAAGGGTACTTTGGTTGAAATCGACTTGCATACATGCGAGCCCTGGCAGCTTCCTGAGGTGGCTAAGCTGAACGCGAGTGAGTGGTACTTCTTCAGCTTCCGTGACCGCAAGTATGCGACGGGGTTTCGGACCAATAGGGCGACGACATCTGGATATTGGAAAGCGACGGGGAAGGATCGGACGGTAATAGATCCGATGACGAGAGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCTCCCAATGGTATCAAAACGGGCTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCTAAGGAAGACTGGGTTTTGTGTAGAGTATTTCACAAAAGCAAAGCATCAGATGACAACAGCAACAACAAACTCATGTTGGACTCTATTTCTTCTCCTTCCCTAACTCTTGCTTCTTCATCTTCTCCAACCAACCATTTCTTCCCTAATTTCATGGCTTATAATAATAATAACCAACTTTCTTCTTCATCTTCAATCCCCACCACCTTCCCCAACCAACATCATTCTAATAATTCTCTCGTCAACTTCCTTCAATTTCCTCGTGAAACAAACACCGCCGCCACCAGCACTGTGACTCATCAGGACCAAATTAGCCCTAGAGGTGGCGGCGAAGATGGTGGCTATGGTGGCTTCTTTGGTTGGGACATGGGCCTTGAAGATAATGGAAGCTTTCAGAATGGCTTTGATGCTATGAGATCATCCTTCGAGGTTGATAATACTAGCATGGTCTTGTTATGA 888 0.4673 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNASEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVIDPMTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKASDDNSNNKLMLDSISSPSLTLASSSSPTNHFFPNFMAYNNNNQLSSSSSIPTTFPNQHHSNNSLVNFLQFPRETNTAATSTVTHQDQISPRGGGEDGGYGGFFGWDMGLEDNGSFQNGFDAMRSSFEVDNTSMVLL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1584 295 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Mibi02g1584 295 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Mibi02g1584 295 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Mibi02g1584 295 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Mibi02g1584 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1584 Mibi-ChrMibi02 15863492 15867419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1584 6 186 NAC Transcription Factor Family AT1G56010 52.910 3.56e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g1584 NAM 1.9e-37 No_clan