Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1579 ATGGATTCTGCCAGAGGTTGGTTTCAGAAGTTTCATCCAAGGGATAAAATGAGGTCTTCTTCGAAGAAGGAGGGTTCTGGAGTTGAAGATTCAGATGCGCAGCTGGATGATGAAGCTCTTTCTAATATAACAAAACAAAAGGTTGCGGCAGCAAAGCAGTATATAGAGAATCATTATAAGGAGCAAATGAAGAGCCTTCAGGATAGAAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAATAATCTTTTCAAGTTTCTGGAGAAAAAGGAAACTGAATATATGCGACTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACTATGATTGGAAAAGGTGCTTTTGGAGAGGTCAGAGTCTGCAAGGAAAAGACAACAGGGCATGTATTTGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGATAGCAATTGCATTGTCAAACTTTACTGTTCTTTCCAAGATGATGACTACCTATACCTGATTATGGAGTATTTACCGGGTGGGGACATGATGACTTTACTTATGAGAAAGGATATCTTGACTGAGGATGAAACTAGATTTTATATCGGAGAGACAGTTTTGGCAATTGAATCTATACATAAACACTATTATATCCATAGGGACATTAAGCCTGATAATTTATTATTGGATAGATATGGACACTTAAGGTTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAGCACACTTCAAGAGGAGGACTTTTCAGAGGGTCAGTGTGTGAATGGTTCTACACAGAATGATCAACATGGATCTTCAAGGCGCACACAACAAGAACAGTTACAACACTGGCAAAAGAACAGGAGGACCCTAGCTTACTCTACTGTCGGTACGCCGGATTATATTGCTCCACAAGTTCTATTGAAGAAAGGTTATGGTATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTATGAAATGTTGGTAGGATACCCTCCTTTTTATTCTGATGATCCAATGACAACATGCAGAAAGATAGTAAACTGGAAAACTTACTTGAAATTTCCTGAAGAGGCAATGCTATCTCCTGAAGCTATTGATTTGATCAGTAAGCTATTGTGCAATGTAAACCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGCTCATCCATTTTTCGAAGGTATTGAATGGGATAAGTTATACCAAATGGAAGCTGCATTTATACCTGAGGTTAATGATGAGTTAGATACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAGCAGCAGTCAACCGTCTTCTAGAAGTGGTCCATGGAGGAAGATGCTCTCATCTAAAGATGTGAATTTTGTCGGGTACACGTATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCCGGAATGGCTGAATTGAAAAAGAAAACCTCCAAAGCTAAGAGGCCATCAATCAAGTCACTTTTTGATGGCGAGACAGCTGAAACATTACCAGAAATCTCTGAGGCTTCTGCAAGCAATAATGAATCTGCTTAA 1602 0.3951 MDSARGWFQKFHPRDKMRSSSKKEGSGVEDSDAQLDDEALSNITKQKVAAAKQYIENHYKEQMKSLQDRKERRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCKEKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYIGETVLAIESIHKHYYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLQEEDFSEGQCVNGSTQNDQHGSSRRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPQVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTYLKFPEEAMLSPEAIDLISKLLCNVNQRLGSKGAGEIKAHPFFEGIEWDKLYQMEAAFIPEVNDELDTQNFEKFDESDSSSQPSSRSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKTSKAKRPSIKSLFDGETAETLPEISEASASNNESA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1579 533 MobiDBLite consensus disorder prediction 1 35 - -
Mibi02g1579 533 FunFam Non-specific serine/threonine protein kinase 314 433 - -
Mibi02g1579 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 467 - -
Mibi02g1579 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mibi02g1579 533 Gene3D Transferase(Phosphotransferase) domain 1 201 433 - -
Mibi02g1579 533 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 488 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi02g1579 533 MobiDBLite consensus disorder prediction 278 299 - -
Mibi02g1579 533 Pfam Protein kinase C terminal domain 434 478 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mibi02g1579 533 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Mibi02g1579 533 SUPERFAMILY Protein kinase-like (PK-like) 90 469 IPR011009 -
Mibi02g1579 533 FunFam Non-specific serine/threonine protein kinase 201 268 - -
Mibi02g1579 533 MobiDBLite consensus disorder prediction 7 30 - -
Mibi02g1579 533 SMART serkin_6 117 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1579 533 Gene3D Phosphorylase Kinase; domain 1 115 444 - -
Mibi02g1579 533 CDD STKc_NDR_like 115 479 - -
Mibi02g1579 533 FunFam Non-specific serine/threonine protein kinase 88 200 - -
Mibi02g1579 533 Pfam Protein kinase domain 118 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1579 533 ProSiteProfiles Protein kinase domain profile. 117 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1579 533 MobiDBLite consensus disorder prediction 497 533 - -
Mibi02g1579 533 SMART pkinase_C_6 416 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1579 Mibi-ChrMibi02 15778543 15790687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1579 1 511 AGC Kinase Gene Family AT2G20470 77.457 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mibi02g1579 Pkinase 5e-62 CL0016