Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1578 ATGATGAAAGTAGGATATGAGTTAATTCATGGAGATTTCATCAACATGATCCGACCAGTACACATGCATGAATCATGGGACTACCCAAATATTAACGTTGGGTTGTCTTCATCAGTTCCAACATCATCATCACCATCATCAATCCCGTTCTCAAAGCCAACACCACCTAATATTGAAAACACAGTAAACTTGGCAACAAACGAGTTATCAGATTGGGTGGAGAATTTTACCAAACACCTTGTGGATGACTTACCAGCTTCTGAAACCACATCTGATCATCATAACAACAATCACTTTCTTCCTTACCAAACAAAGTCTCCTTCCCATCCTCATCATGACAACCTCGTACCCACACTAGTTTCCCCTGTTGTTCTATACCCAAGAAAATCCCCCTTCACCTTCAACAATAACGACCAGCAAATCCAAACTCAAACAAACCCATTATTAGATCATCATCATCATCAAGACCAGAGCAATGATAATGGGTTACATCTTTTAACACTTCTAATGGAGTGTGCAGTGGCAATTTCAGTGGACAACCTCAACGAAGCACAAAGGATGTTACTTGAACTCACCCAAGTTGTCTCACCTTACAAGCCATCTTGTGCAGAGAGAATTGTCGCCTACTTTGCAAAAGCCATGTCAAGCAGAGTAATGAATACATGGCTAGGAGTATTTCCCCCATTAATTGATCACAGAACAATTCACTCCTCATTCCAAATCTTCAACAACATTTCCCCTTTCATCAAATTCGCACATTTCACTTCAAATCAAGCCATCCTCGAAGCAGTACATTACTGTGACAACATCCATATCATAGACTTAGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCATATTCTTGCCACAAGAATCGAGGGTCGGCCACGTGTAAGAATGACAGGAATGGGGTCTTCCATGGAACTCCTGGTAGAAACAGGGAAACAACTCACGAACTTCGCTAAAAGGCTTGGCATGTCCTTCCATTTCCAACCAATAGCAAGAAAGTTCGGAGAAATTGATGATTTCTCATCCATGATTCAAGTAAGACCGGGTGAAACACTCGCCGTACACTGGCTACAACATTCTCTGTACGATGCAACAGGATCAGATTGGAAAAGTTTGAAACTTCTTGAACAATTAGAGCCCAGAATCATAACATTGGTGGAACAAGATGTTTCAAATGGTGGGTCGTTTTTGGATCGATTTGTTGGGTCTTTACATTATTACTCTACTGTGTTTGATTCTCTGGGGGCTTATATGGCAAGTGAGGATTGTAACAGGCATAAGGTTGAACATGAGCTTTTGGGTAAGGAGATAAGTAACATATTGGCCATTGGAGGGCCTGCTAGGAGTGGGGAAGATAAGTTTAGGCAGTGGAGAAGTGAGCTTATGGGGAGGCACTGTTTTGTGCAAATTCCTATGAGTGCTAATTCTATGGCTCAAGCTCAATTGATATTGAATATGTTTTCTCCTAATCATCATTATGGACATGGCTATACTCTTGCTCATGTTGATGGCACTCTTAGACTTGGTTGGAAGAACACTAGCTTGTATACTGCTTCTGCATGGACTTGTTATAATTCCACCAATAAACAATAA 1608 0.4111 MMKVGYELIHGDFINMIRPVHMHESWDYPNINVGLSSSVPTSSSPSSIPFSKPTPPNIENTVNLATNELSDWVENFTKHLVDDLPASETTSDHHNNNHFLPYQTKSPSHPHHDNLVPTLVSPVVLYPRKSPFTFNNNDQQIQTQTNPLLDHHHHQDQSNDNGLHLLTLLMECAVAISVDNLNEAQRMLLELTQVVSPYKPSCAERIVAYFAKAMSSRVMNTWLGVFPPLIDHRTIHSSFQIFNNISPFIKFAHFTSNQAILEAVHYCDNIHIIDLDIMQGLQWPAFFHILATRIEGRPRVRMTGMGSSMELLVETGKQLTNFAKRLGMSFHFQPIARKFGEIDDFSSMIQVRPGETLAVHWLQHSLYDATGSDWKSLKLLEQLEPRIITLVEQDVSNGGSFLDRFVGSLHYYSTVFDSLGAYMASEDCNRHKVEHELLGKEISNILAIGGPARSGEDKFRQWRSELMGRHCFVQIPMSANSMAQAQLILNMFSPNHHYGHGYTLAHVDGTLRLGWKNTSLYTASAWTCYNSTNKQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1578 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 140 523 IPR005202 -
Mibi02g1578 535 Pfam GRAS domain family 166 527 IPR005202 -
Mibi02g1578 535 ProSiteProfiles GRAS family profile. 156 527 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1578 Mibi-ChrMibi02 15766735 15768342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1578 131 527 GRAS Transcription Factor Family AT3G54220 51.351 1.13e-132 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi02g1578 GRAS 3.3e-99 CL0063