Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1577 ATGAATAAATATTTCATCCTCATTGCTGGAGGATAATTTGAGCAGAAACTCCATTGCATTCGCTGGCCGTGGGGTTGGTGTATCGAGGATAATTTCATCATGGATCATTTGGTTGGTGGGAAGTTTAAACTGGGGAGGAAAATTGGGAGTGGTTCTTTTGGGGAGCTTTATTTAGGCGTAAATGTGCAAAATGGAGAGGAGGTGGCTGTTAAGCTGGAGCCTGTGAAGACCAGGCATCCTCAACTTTTCTACGAGTCAAAGCTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAATGGTTTGGAGTCGAGGGAGACTATAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAACTATTGCAACCGGAAATTCACATTGAAGACTGTTTTAATGCTTGCCGATCAATTAATTAACAGAATTGAATATATGCATTCTAGAGGTTTTCTTCACCGTGATTTAAAGCCTGACAATTTTCTCATGGGCCTTGGACGTAAGGCAAATCAGGTATACATAATTGACTATGGCCTTGCGAAGAAGTATAGGGATCTTCAGACTCATAAGCACATTCCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCTAGTGTGAACACCCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTCCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACAAAAAAACAAAAATATGATAAGATCAGTGAGAAGAAGGCATCAACCCCAATTGATGTGCTCTGTAAATCATACCCATCTGAGTTTGTATCTTACTTCCACTACTGCCGATCGTTGCGTTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGACTTTTTCGAGATCTATTTATTCGAGAAGGCTGTCAGTTTGACTATATTTTTGATTGGACTATGTTGAAGTATCCACAGATTGGTTCTAGCTCTAGAGGACGGCATGGCAGTGGCAAAGCAGCTATGAATGCAGGACCATCTGTGCAAAAGCCAGAAAAGATGACAGTTGGGAAAGATCCTCGAGAGAAGTTCTCTGGCGCTGTTGAAGCATTCTCCAGGAGGATCCCCACAAGTTCCAGTCCTCGGGCTGATCAAGCTAAGCAAAAGATGTTTGAGGATGTACAGCAACATAAGGATATGCACCGTGAACAAGAGAAGGTACACAGTTCAGCTCGATATGGAAGCAGTTCAAGGAAAGCCCTCATCTCATCAAACAAGCCAAGTTCGTCGGCTGACCACAGCGATTCTCGTACCGGTCGGCTGACTACAAGCAGTAGCCGCCCTTCTACCACACGTGCATTGTATGAGAGCAAACAACCAAGTTTCGCACGCAACATGCCTGCTAGAGGCAATCGTGATGATACTCTTAGGAGCTTTGAGCTTCTCTCTATCAGGAAGTAA 1473 0.4372 MNKYFILIAGGXFEQKLHCIRWPWGWCIEDNFIMDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKTRHPQLFYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRIEYMHSRGFLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKASTPIDVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGCQFDYIFDWTMLKYPQIGSSSRGRHGSGKAAMNAGPSVQKPEKMTVGKDPREKFSGAVEAFSRRIPTSSSPRADQAKQKMFEDVQQHKDMHREQEKVHSSARYGSSSRKALISSNKPSSSADHSDSRTGRLTTSSSRPSTTRALYESKQPSFARNMPARGNRDDTLRSFELLSIRK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1577 490 PANTHER CASEIN KINASE-RELATED 40 432 - -
Mibi02g1577 490 MobiDBLite consensus disorder prediction 390 413 - -
Mibi02g1577 490 Pfam Protein kinase domain 43 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1577 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Mibi02g1577 490 Gene3D Transferase(Phosphotransferase) domain 1 27 369 - -
Mibi02g1577 490 MobiDBLite consensus disorder prediction 334 484 - -
Mibi02g1577 490 MobiDBLite consensus disorder prediction 358 372 - -
Mibi02g1577 490 FunFam Putative Casein kinase I 34 118 - -
Mibi02g1577 490 MobiDBLite consensus disorder prediction 414 462 - -
Mibi02g1577 490 SMART serkin_6 42 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1577 490 FunFam Casein kinase 1-like protein 34 363 - -
Mibi02g1577 490 CDD STKc_CK1_delta_epsilon 41 314 - -
Mibi02g1577 490 ProSiteProfiles Protein kinase domain profile. 42 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1577 490 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Mibi02g1577 490 SUPERFAMILY Protein kinase-like (PK-like) 37 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1577 Mibi-ChrMibi02 15752021 15759197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1577 44 314 MAP Kinase Kinase Kinase AT1G62400 26.056 4.19e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mibi02g1577 Pkinase 7.4e-26 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1577 02 15752021 15759197 Mibi02g1577 02 15752021 15759197 ECH