Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1562 ATGAAAAGTAGAATCAGGGAAAGAAGGAGGCGCAATATAAACAATTTGCGGAGGATAATGAAGTGCCTATGTTCAGGGGAGCAGTTAAGATGTGAAGACGAAATGGTTCCTTCATCCGAATCTCATGCATCCAAGGATTATTCAGTGAGTGGGGATTCTTTCATAGCTGGACAAGTTGACAAGAAGAAGCCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATTCCAGAAAGGAAACATTGAAGCCGCTTTACATGTATTTGAAGGAATAGATATAGGTGCTGTGACTTCTAAAATTAAAATTTCCCTTGCTCAAAGGGCAGAACAACCTAAGAGACATAAAAGACATTCCCAGCCTTATGCTGCACCCCCAATGTCAATACATGCTGTTGGCCTACTGTTGGAAGCAGCCCTCCTGAAAGCAAAATCGTTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGACTCTTCATTACCCGAAGGTTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGATTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATAGTCCACGTGAAGCTATTGTGTCTTATAGGCGGGCACTCCTTAATCGATGGAATCTTGATGCAGAGACTACAGCAAAGATTCAGAAGGAGTTTGTCATATTTCTTCTATATAGTGGTGGGGAAGCAAGCCCCCCAAATCTCCGATCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCCATACTTCTGTTGATGATTTTGGTAAGAAAAGTCACTTTAAATAGAATTGAGTGGGATCCTTCAATATTAGACCACCTTTCATTTGCTCTATCTGTTTCTGGGGATTTGACAACTCTAGCCAATCAAGTGAAAGAATTGCTCCCCGGGACTATCAACCGAAGAGAAAGGTATTTTACTCTTGCTCTCTGTTATTTTGGAGCTGGAAAGGACTTGATGGCTCTGGATCTTCTCAGAAAAGTGTTGAGTAGTAAAGAGGATCCTAAACATATTCCAGCTTTGCTAATGGCATCTAAAATATGTTCTAATGACCCTAGTCTTGCTGAAGAAGGGGTAAGTTGTGCTTCCAGAGCGCTTGACAGCTTGGATGATAGATGCGATAAGTTAGGGAGTGTTGCCAATTGCTTACTTGGCGTTTCACATTCAGCAAATTCGAAATTAGCCATTTCTGAATCTGAGAGATTTGAGAGGCAATCTGAGGCACTTCGTGCTCTGGAGACTGCTGGCAAAATGACTCAAATGAGAGACCACAATGTATTATACCATCTAAGTTTAGAATATGCGGAACAGAGGAAGTTGGATGATGCTCTTCATTGTGCAAAATGTCTTCTAAAACTGGAAGCTGGGTCTAACATCAAAGGGTGGCTGTTGTTAGCTCGAATACTATCGGCTCAAAAAAGGTTTTCAGATGCTGAATCTATTATCAACGCTACTTTGGATCAGACTGGGAAATGGGACCAAGGGGATTTATTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAGGAGTGCCATTGAGACATATACTCAACTTCTCGCTGTTTTTCAAGTTCAAAAGAAAACATTTGGTTCTGGGAAGAAGCTATATAAGGAGAACAGATATCATGTGAGGAATCTGGAAGTCCAAGTATGGCATGATCTTGCCTGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTGCTCTGCTTCGAGATGTCATATAACAGGAACACTGTATGAAGCAAAGGGTCTTTACAAAGAAGCTTTAAAGGCTTTTGGTGATGCTTTGGACATTGATCCCAATTATGTGCCAAGCTTGATTTCCAGTGCCTTGGTTCTGAGACGGTGTAGTAGTAGTAGTAAGGAAGTGAATGCTGTAGTGAGAAGCTTTTTGATGGATGCACTGCGCCACGATAGAATGAATGCTGGTGCATGGTATAATATTGGCCTTGTTCACAGGGATGAAGGTACAGTCTCTTCATTAATGGAAGCCGCAGAATGTTTTGAGGCTGCTCATCTTCTTGAAGATACATCGCCTGTTGAACCTTTCAGATGA 2217 0.4177 MKSRIRERRRRNINNLRRIMKCLCSGEQLRCEDEMVPSSESHASKDYSVSGDSFIAGQVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNIEAALHVFEGIDIGAVTSKIKISLAQRAEQPKRHKRHSQPYAAPPMSIHAVGLLLEAALLKAKSLQALGRFKEAAQSCKVILDIVDSSLPEGLPENFGAECKLQEILSNAVELLPELWKLADSPREAIVSYRRALLNRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILVRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANQVKELLPGTINRRERYFTLALCYFGAGKDLMALDLLRKVLSSKEDPKHIPALLMASKICSNDPSLAEEGVSCASRALDSLDDRCDKLGSVANCLLGVSHSANSKLAISESERFERQSEALRALETAGKMTQMRDHNVLYHLSLEYAEQRKLDDALHCAKCLLKLEAGSNIKGWLLLARILSAQKRFSDAESIINATLDQTGKWDQGDLLRTKAKLQIAQGQLRSAIETYTQLLAVFQVQKKTFGSGKKLYKENRYHVRNLEVQVWHDLACVYISLSQWHDAEMCLSKSKAIKLCSASRCHITGTLYEAKGLYKEALKAFGDALDIDPNYVPSLISSALVLRRCSSSSKEVNAVVRSFLMDALRHDRMNAGAWYNIGLVHRDEGTVSSLMEAAECFEAAHLLEDTSPVEPFR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1562 738 ProSiteProfiles TPR repeat profile. 623 656 IPR019734 GO:0005515
Mibi02g1562 738 Pfam Tetratricopeptide repeat 630 656 IPR019734 GO:0005515
Mibi02g1562 738 PANTHER PROTEIN NPG1 20 738 IPR043376 -
Mibi02g1562 738 Gene3D Tetratricopeptide repeat domain 436 616 IPR011990 GO:0005515
Mibi02g1562 738 SMART tpr_5 533 566 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 623 656 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 462 495 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 589 622 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 340 373 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 497 530 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 696 732 IPR019734 GO:0005515
Mibi02g1562 738 SMART tpr_5 155 188 IPR019734 GO:0005515
Mibi02g1562 738 SUPERFAMILY TPR-like 341 615 IPR011990 GO:0005515
Mibi02g1562 738 SUPERFAMILY TPR-like 534 710 IPR011990 GO:0005515
Mibi02g1562 738 Gene3D Tetratricopeptide repeat domain 617 726 IPR011990 GO:0005515
Mibi02g1562 738 Gene3D Tetratricopeptide repeat domain 58 435 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1562 Mibi-ChrMibi02 15500829 15506837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1562 10 738 Calmodulin-binding Proteins AT4G28600 57.781 0.0 788
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2382 06 44049892 44056793 Mibi02g1562 02 15500829 15506837 CCT
Mibi02g1562 02 15500829 15506837 Mibi02g1562 02 15500829 15506837 ECH