Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1558 ATGACAACCTTTTCAAAAGCTCCTCCTTTCTTCTTTCTTCTGCTCCTACTATTCTTACTTCCATTGCTGATCATTGCTTCTCCTAGAACTGAAGCAGAAGCTCTTATCAAATGGAAAACTAGTCTCTCTCTTCCTCTTCCTCTTCCTGATCTTCTCAATTCATGGTCCCTCACCAACCTCAACCATCTCTGCAATTGGGAAGCCATTGTTTGTGATAATACTAACACTACAATCTCAGAGATAGATCTCTCAAATGCAAACCTCACTGGCACACTTGAAGAGTTTGATTTTGCTTCTCTTCCCAATCTTTCCCTCTTGAACCTCAATAGCAACAGTTTTAGTGCGTCAATTCCTTCTGCAATTGGTAACCTCTCCAAGATCAGTTTCTTGGATCTGGGATCAAACTTCTTTGAAGGACCACTTCCTTCTGAACTGGGTCAGCTAAAAGAGCTTCAATATCTTAGTGTTTACTTAAATAATCTCAACGGTACTATTCCTTATCAGATCACAAATCTTCCAAAGGTATGGCACCTAGACCTTGGCTTGAACTACTTTATATCTCCTGCTGATTGGTCATATTACTCAGGAATGCCATCTTTAACCCACCTCAGTTTGACTTTCAATTCTTTCACTTCCGAATTCCCAAGTTTCATACTTGAATGTCAGAACTTGACATACCTTGACATCTCTCAGAATGACATGTCTGGCCTAATACCAAATTCCGTGTATACTAGTCTGGTTAAGCTTGAATATCTAAATCTTACCAACTGTGGACTAGAAGGACCTTTGTCATCAAATTTGTTCAAGCTTTCTAATCTAAAAGAACTTCGCTTGGGGACTAACAATTTTTCTGGTCCTATCCCCACCGAGTTAGGGTTGATGTCTGGACTTAAACGTCTTGAATTAAATAACAATTCAATTGGAGGGGAGATTCCTACCTCACTAGGAAATCTCAGGGATCTAGTGATACTTGATCTCCGTGAGAATTTTTTGAATTCTACCATGCCTCCTGAGCTTGGCTTCTGCACTAATCTAACCTTCATGAGTTTGGCAGTGAATAATTTGACTGGTCCTTTGCCTTTGTCATTATCTAAACTGACCAAAATAGCAGACTTAGGCTTATCAGAAAATTCCTTTTCGGGCCAGCTTTCTTCTTTGTTGGTTTCAAATTGGACTGATTTGGTCTCTTTGCAACTTCAACACAATAAATTCACGGGACAAATCCCGCCAGAGATTGGCTTGTTGACAAAAATCGCATACATGTATCTGTATTATAACGAGTTCTTTGGTCCCATTCCTCATGAGATTGGAAACTTAAAAGTATTGATGGAACTAGACCTTTCAGGGAACCAATTCTCCGGGCCAATTCCATCAACTATTTGGTCTCTTTCAAACATTACCACCATAAATCTCTACTCCAATAAGCTCTCCGGAAACATTGCCATGGATATAGGAAACTTGACCTCTCTACAAGCTTTCGATGTCAACACAAACTATTTGCAGGGAGAGTTACCAGAGACTATTTCTCAGCTAACTGAGTTACAGTTCTTTTCTGTATACACCAATAATTTTTCAGGCAACATTCCTAAGAATTTTGGGAAGTATAGTCCTTCTTTGAGTCATGTCAGCTTCTCAAACAATAGCTTCTCTGGAGAACTGCCAAGTGATTTGTGCAGTGGTTTCAAAATAATACATTTGACTGTGAATAACAACAGTTTTTCTGGACAAGTACCAAACTGCCTGAAAAAATGTTCAGAACTGTTTCGAGTCCGTCTTGATGGAAATCAATTCACAGGAAATATCACAGAAGCATTTGGAGTTCATCCCAGTCTTGTCGTTGTCTCATTGAGTGGCAATCAGTTTTTTGGCGAGCTCTCTCCTATGTGGGGTGAATGCTTAAACCTAAGCAGGATAGAAATCGACAGAAATAAACTCTCAGGTAAAATTCCACCTGAACTAGGTAAGTTGAACCGATTGCAATATTTAAGCCTATCCTCCAACGAATTGACTGGCCATATCCCACCTGAAATGGGCGACCTTAGCGGCCTTTACATGTTCAACTTGAGCAAGAACCATTTGACAGGGAAGATCCCAGAGAGTATTGCCAGATTAGCTCATCTTAATTATCTTGATTTATCAGATAACAACTTGATTGGAAGCATACCCCAACAACTTGGTGACCATGATGGCTTAAATAGCTTGAATTTAAGTCACAACAATCTAACTGGGGAGATACCATCTGAGCTTGGCAACCTGTTCTCGCTCCAATACCTCTTGGATCTCAGTAGCAACTCTCTTTCAGGGCCAATTCCTCAAAACCTAGGGAAGCTCATTTCTTTGATGATACTCAATCTCTCACACAACCATCTTTCAGGGACAATCCCACTAACCTTTCCAAGTATGTTGAGCCTCCAGTCTATTGATTTTTCTTATAATAACTTAACGGGTTCAATCCCAACCGGGGGTATTTTCAAAACAGCACCTGCTACAGCTTACGTTGGAAACTCATTGTGTGGGGAAATAAAAGGATTAACTACTTGCCCTACAGCATCTACCCCAGAAAAGTCCAAAGGAATAAACAAAAAGGTTATTCTTGGGATTATTATACCAGTTTGTGGTCTATTAATCATAGGGATGATCGGATTTCTGATATTCCGCAGGCAGTCTAAATCCCTTGACGAACAGATGAAAGATAGTGAAAAGAATGAAAAATCTGTATCCACAATATGGCGCAGAGATGGAAAATTCACATTTGCTGAAATTGTCAAGGCAACCGAAGATTTCAATGAGAGGTACTGCATAGGAAAAGGAGGATTTGGAAGCGTTTATAGAGTAGAATTACCAACAGGTCTAGTTGTAGCAGTTAAAAGATTCAATATCCCAGATACCAGTGACGTTCCAGCAGCAAATCTCCAAAGTTTTGAGAATGAGATAAGAACACTTACCGAAGTGAGGCATCGCAATATCATCAAGTTTTATGGGTTCTGTTCCAGCAAGGGACGCATATACCTGGTGTATGAATATATGAACAGAGGCAGTCTGAGCAAAGTACTGTCCGGGGAAGGAGGCACATCAGAACTAGACTGGCCTATAAGGATAAGAATTGTGCAGGGAATAGCACATTCAATTGATTACCTTCACAGTGATTGTTCCCCACCTATAGTTCACCGAGACGTTACGCTCAACAACATATTATTGGACTCAGATTTTGAACCCCACCTAGCAGATTTTGGCACTGCAAAGCTACTAAGCTACAATTCAACAACATGGACCTCAATTGCTGGATCCTATGGCTACATGGCTCCAGAGTTAGCACAAACCATGAAGGTGACGGAGAAATGCGATGTGTACAGCTTCGGGGTGGTGGCGTTGGAGATAGTGATGGGGAAGCACCCAGGAGATCTCCTAACTTCGATAAATTCGATGCAGTATTTGTCATCAATGGAGGAATCAGAGGAGCTTCTAAAGGATTTGCTGGATGAGAGGCTACCACCTCCAAGAGGGAAATTAAGGGAAGCAATAGCGTTCATAGTGAAATTAGGGTTTTCCTGCACGCGTAATAATCCAGAGTCGAGACCAACGATGCGTTCTGTGGCAAAAGAAATTTCGGTAAAGGTGCAAACTTGTAATGCAGAGCCATCTGGGAAGATGAACAAAAGCAAGTTCACAGGGCATTAG 3678 0.4084 MTTFSKAPPFFFLLLLLFLLPLLIIASPRTEAEALIKWKTSLSLPLPLPDLLNSWSLTNLNHLCNWEAIVCDNTNTTISEIDLSNANLTGTLEEFDFASLPNLSLLNLNSNSFSASIPSAIGNLSKISFLDLGSNFFEGPLPSELGQLKELQYLSVYLNNLNGTIPYQITNLPKVWHLDLGLNYFISPADWSYYSGMPSLTHLSLTFNSFTSEFPSFILECQNLTYLDISQNDMSGLIPNSVYTSLVKLEYLNLTNCGLEGPLSSNLFKLSNLKELRLGTNNFSGPIPTELGLMSGLKRLELNNNSIGGEIPTSLGNLRDLVILDLRENFLNSTMPPELGFCTNLTFMSLAVNNLTGPLPLSLSKLTKIADLGLSENSFSGQLSSLLVSNWTDLVSLQLQHNKFTGQIPPEIGLLTKIAYMYLYYNEFFGPIPHEIGNLKVLMELDLSGNQFSGPIPSTIWSLSNITTINLYSNKLSGNIAMDIGNLTSLQAFDVNTNYLQGELPETISQLTELQFFSVYTNNFSGNIPKNFGKYSPSLSHVSFSNNSFSGELPSDLCSGFKIIHLTVNNNSFSGQVPNCLKKCSELFRVRLDGNQFTGNITEAFGVHPSLVVVSLSGNQFFGELSPMWGECLNLSRIEIDRNKLSGKIPPELGKLNRLQYLSLSSNELTGHIPPEMGDLSGLYMFNLSKNHLTGKIPESIARLAHLNYLDLSDNNLIGSIPQQLGDHDGLNSLNLSHNNLTGEIPSELGNLFSLQYLLDLSSNSLSGPIPQNLGKLISLMILNLSHNHLSGTIPLTFPSMLSLQSIDFSYNNLTGSIPTGGIFKTAPATAYVGNSLCGEIKGLTTCPTASTPEKSKGINKKVILGIIIPVCGLLIIGMIGFLIFRRQSKSLDEQMKDSEKNEKSVSTIWRRDGKFTFAEIVKATEDFNERYCIGKGGFGSVYRVELPTGLVVAVKRFNIPDTSDVPAANLQSFENEIRTLTEVRHRNIIKFYGFCSSKGRIYLVYEYMNRGSLSKVLSGEGGTSELDWPIRIRIVQGIAHSIDYLHSDCSPPIVHRDVTLNNILLDSDFEPHLADFGTAKLLSYNSTTWTSIAGSYGYMAPELAQTMKVTEKCDVYSFGVVALEIVMGKHPGDLLTSINSMQYLSSMEESEELLKDLLDERLPPPRGKLREAIAFIVKLGFSCTRNNPESRPTMRSVAKEISVKVQTCNAEPSGKMNKSKFTGH 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1558 1225 SUPERFAMILY RNI-like 504 818 - -
Mibi02g1558 1225 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 536 851 - -
Mibi02g1558 1225 PANTHER LEUCINE RICH REPEAT KINASE 2 57 229 - -
Mibi02g1558 1225 Gene3D Phosphorylase Kinase; domain 1 888 1008 - -
Mibi02g1558 1225 Gene3D Ribonuclease Inhibitor 191 506 IPR032675 -
Mibi02g1558 1225 Pfam Leucine Rich repeat 705 719 IPR001611 GO:0005515
Mibi02g1558 1225 Pfam Leucine rich repeat 198 259 IPR001611 GO:0005515
Mibi02g1558 1225 FunFam MDIS1-interacting receptor like kinase 2 28 191 - -
Mibi02g1558 1225 FunFam MDIS1-interacting receptor like kinase 2 1009 1208 - -
Mibi02g1558 1225 ProSitePatterns Protein kinases ATP-binding region signature. 934 956 IPR017441 GO:0005524
Mibi02g1558 1225 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1054 1066 IPR008266 GO:0004672|GO:0006468
Mibi02g1558 1225 ProSiteProfiles Protein kinase domain profile. 928 1204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1558 1225 Gene3D Transferase(Phosphotransferase) domain 1 1009 1221 - -
Mibi02g1558 1225 Gene3D Ribonuclease Inhibitor 507 850 IPR032675 -
Mibi02g1558 1225 SUPERFAMILY Protein kinase-like (PK-like) 906 1200 IPR011009 -
Mibi02g1558 1225 SUPERFAMILY RNI-like 106 509 - -
Mibi02g1558 1225 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 437 532 - -
Mibi02g1558 1225 CDD STKc_IRAK 934 1202 - -
Mibi02g1558 1225 FunFam Leucine-rich repeat receptor protein kinase MSP1 891 1008 - -
Mibi02g1558 1225 Pfam Protein kinase domain 933 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1558 1225 SMART LRR_typ_2 656 680 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 704 728 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 487 511 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 801 826 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 777 800 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 270 294 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 100 124 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 439 463 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 197 221 IPR003591 -
Mibi02g1558 1225 SMART LRR_typ_2 318 342 IPR003591 -
Mibi02g1558 1225 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Mibi02g1558 1225 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Mibi02g1558 1225 FunFam MDIS1-interacting receptor like kinase 2 195 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1558 Mibi-ChrMibi02 15463712 15467689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1558 25 674 Receptor kinase-like Gene Family AT4G08850 32.104 4.95e-86 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi02g1558 Pkinase 1.1e-46 CL0016