Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1557 ATGGGTCATTTTGATGCATTATTTTTAAGCAGAAGTCCCACTCGTTACCGTTCCCTTCTTTGTCTTGCCGGTGGCGGAATCTTAAACCACCCTTACCCCTCTCTTCAGGGTTTGCTTCTTCCTTCCCTTCTCCTAATTTTGTGGTTTCGATTCGATTCTCCATCCCCCGAGCTTCCTGTTTGCTTCTTGGGTAATGATTTGACACCCCTTTTGTTTCGGGCTATCGGGATCCTTTTCCTCTCATCCTCTTTTTGGAAAATCATGGAAGCACGCCCTGCCTTTTCTATTGAAAGAGGTGCAAAGCAACTCAGTAGCATGGGAATGTCTTCACCCCTTCCTGTTAACCCAACACCCTTAGAAGAGACATATTCCAAGTTACCTGATTCTCAGCAGGCTTTTGTGGAAAAAGAGTGCATGGCAAGACCTCTCACTCATTCAAGTCACTCGAATTCCAGTGGAGCAGTTGGGCACATGTTTTCATCATCCCCTGGATATTCTACTGATCTTCATCACTCATCTCTTCCACCTCATGGAAAACACTCAAGAAATCCGCATTTTATTTCACATTCTTCAAGTACCATGGCATCATTGCCATTGTCATATTCTTCAAGTACTGGACCACTGCCTTCTACAACGTCAAGTTGTTATTCCAAAGAAAGTAATGGGTCCTGGGCTGCAGATTCCTTGCCAAACATTCTCGATTTTCCTGTAAATACTTCCATTAGGGCTAGTCAAGTAGAAAACAGTGCCTGCAATGTAATGGCACCTGATGAGTATGGTAAGAAAAATGATTGGCAGGAGTGGGCTGACCAACTGATCAATGATGATGATGATGCGTTGACTTCTAACTGGAATGACATTCTTGTTGACCCCAGCATTTATGATCTTGAACCAAAGGTGTCATGCCAGACTTCAAAATCATCTTCACAATTGCCAGGGCTGCAGCCCCAAGGTCACCAGCAACTTTCAGCTTCATCAGGTGATATACAAATTAGTGCTCCACCCTCTTCCTCAGCAAATTCTACTCCTGCCAAGCCTCGAATGCGTTGGACGCCCGAACTTCACGAGGCCTTTGTGGAGGCTGTCAACAAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTTATGAAAGTAGAAGGCTTAACAATATATCACGTTAAAAGCCACTTGCAGAAATATAGGACTGCTAGATATAGACCGGAGTCATCTGAAGGATCCACGGAGAAAAAGTTAACTCCAATGGAAGAGATGTCATCTCTAGACTTGAAAACTGGTATTGAGCTCACTGAAGCTCTGAGACTGCAGATGGAGGTTCAGAAGCGCCTGCATGAACAACTAGAGATTCAAAGGAATTTACAGTTGCGGATTGAAGAGCAAGGAAGGTACCTCCAAATGATGTTTGAGCAACAATGCAAATCTGGCGTCGAAAAGTTTAAGGCATCATCATCTGCCATTGAGGGTCCCTCTGGAGTGTCATCAGATGCTATCAAAGATTCTTCTGCTAAAACTGAAGTTGGTGTCTCCCAAGTGGACCATTGCAAGTCAGGAACAGAACAAGATAATAGCAATGCCATTGTTGAAGAAAGCTCACTGAAAGGTGTTGAGAAGCATAGTGCTCCTGAAAGTCGAACTTCTGATAATCTTAAGCAACATACGAGTGAAGATGATGTTAATGCTGAACCATCAAAGCGTCAAAGGACAGACGAATAA 1722 0.4402 MGHFDALFLSRSPTRYRSLLCLAGGGILNHPYPSLQGLLLPSLLLILWFRFDSPSPELPVCFLGNDLTPLLFRAIGILFLSSSFWKIMEARPAFSIERGAKQLSSMGMSSPLPVNPTPLEETYSKLPDSQQAFVEKECMARPLTHSSHSNSSGAVGHMFSSSPGYSTDLHHSSLPPHGKHSRNPHFISHSSSTMASLPLSYSSSTGPLPSTTSSCYSKESNGSWAADSLPNILDFPVNTSIRASQVENSACNVMAPDEYGKKNDWQEWADQLINDDDDALTSNWNDILVDPSIYDLEPKVSCQTSKSSSQLPGLQPQGHQQLSASSGDIQISAPPSSSANSTPAKPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGSTEKKLTPMEEMSSLDLKTGIELTEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEQQCKSGVEKFKASSSAIEGPSGVSSDAIKDSSAKTEVGVSQVDHCKSGTEQDNSNAIVEESSLKGVEKHSAPESRTSDNLKQHTSEDDVNAEPSKRQRTDE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1557 573 MobiDBLite consensus disorder prediction 486 573 - -
Mibi02g1557 573 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 342 402 IPR017930 -
Mibi02g1557 573 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 322 557 IPR044848 GO:0003700
Mibi02g1557 573 MobiDBLite consensus disorder prediction 164 219 - -
Mibi02g1557 573 MobiDBLite consensus disorder prediction 489 532 - -
Mibi02g1557 573 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 345 399 IPR006447 GO:0003677
Mibi02g1557 573 MobiDBLite consensus disorder prediction 185 219 - -
Mibi02g1557 573 Pfam MYB-CC type transfactor, LHEQLE motif 430 477 IPR025756 -
Mibi02g1557 573 Coils Coil 433 453 - -
Mibi02g1557 573 SUPERFAMILY Homeodomain-like 342 399 IPR009057 -
Mibi02g1557 573 Gene3D - 344 403 - -
Mibi02g1557 573 MobiDBLite consensus disorder prediction 304 345 - -
Mibi02g1557 573 Pfam Myb-like DNA-binding domain 347 398 IPR001005 -
Mibi02g1557 573 MobiDBLite consensus disorder prediction 534 573 - -
Mibi02g1557 573 MobiDBLite consensus disorder prediction 304 347 - -
Mibi02g1557 573 FunFam Myb family transcription factor 344 402 - -
Mibi02g1557 573 MobiDBLite consensus disorder prediction 399 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1557 Mibi-ChrMibi02 15454518 15461632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1557 88 487 G2-like Transcription Factor Family AT4G28610 49.510 6.60e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi02g1557 Myb_DNA-binding 6.2e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1557 02 15454518 15461632 Mibi06g2373 06 43957320 43959934 CCT
Mibi02g1557 02 15454518 15461632 Mibi02g1557 02 15454518 15461632 ECH
Mibi02g1557 02 15454518 15461632 Mibi06g2373 06 43957320 43959934 ECH