Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1553 ATGCATAACTTTCTTGATCTAACATCTATAGCTGTCGGAACATGTTCTGGCTTGTCAAACAATCAGGAACAAGATATGGAGGATGAAGAAGCGCATGTTCAGGATGAACCAGTGCGACCTCTGAAGAGGTTGCGCCTAAGAGGCCATGAGAATCAGGCTTCAGATCCGCTGAGTATTTGCGGAACTAGCTCATCTGCCTCTCCATCTAAAATGCCTAAAGTAGAAGACTATGAATTGCCCCAGCAGCCTCAATACAAGGCAATATCACCTCGGCCCAACAGAAATGCAGAGACTGAAGATCGTCCTGCTCCAGTGCAAGACAGTATTGTTGAGAAAGGGAAACAACGTGTATCAGGTCAAGCTGCTCCTGGAGGAAGAAGACAGCTTGTATCCGAAAGATTGTCTCCATCAGTTCCACTTAAAGAGCCTACAGCTGAACAAAGAATTGTGGTGTCACCGAAAAACCGGTTGCCCAGTACTTATGCATTAATCTTGCCTAAGGATGAGCCAATTGATGAACTGGCAGATTATGATGCTCCTTTGGCAACAATTTATCCTGGTATCTTACTAGTTTTCCCTGATGCGAATTTTATTCATTTCTGGAACCATTTATATAGAGGTAGAAGCGAAGGTATTCGGGATTCATCAGATGAAGCAAACCATGAGGTCGTGGCAAATCGAGAATGTTCTATTGTAGAGATAGCCTCCTCAACATCAGGAGAGGTAAAAATTACTATGAGCTGCAGTTCAGCTCTTGGGAGATCAGATTTTCGTTTGCCTAGTCGAGATCAACTTTTAAAAAAGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAATTTTTCTATCATGAAAATGTTGAGAGATATGTGTGACTGCATGTTGGAATTCAGAACTGATTCAAATGATGACTCACAGGAAGGATCTGAAATGATACCGAGTCTAAATGTAATGAAGGAATCTAGGACACGTGATGCTGGCATGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTGGATGCATCTCACATTTCCATTTCTCCCCCGGTCATGACTGGTATGAATAATACTGTACTAGTCACCAATAAGGCCAGAAGTGATTTTCCAGGATGTGATGATGGAAAGGGGCTGGAGGATCCTGTTTCTTCACATTCAGGTAGTTTGGTTGTTGTTCAACAGCATCAGCTTACTCCTGACGATTTAAGGTCTCTTCATGGTGCTGATGACCTTTCAAAAGGAGAAGAAAATCTCCGAATTCCATGGGTGAATGAAATAACAAATGATTTCCCTCCACCTTTCCACTATCTGCACCAGAGCATTGCTTTCAGAGATGCTTATGTTAACTGGTGTCTTTCAAAGATCAAGTGTGAGGATTGCTGTTCAACTTGTTTGGGCGATTGTCTTCAGTCCCCAACACCCTGTGTTTGTGCAAATAAAATTGAGGGTGGATATGCATACACATCTGAAGGGCTACTGAAGGAAAAGTTCTTGGAGGAATGTATTACCATTAGCCGCAACCCTGAACGACATCAGTTCTATTGTCAAATCTGCCCCTTTGAAAGAGCAAAGAACGATGATTGTTTAGAACCATGTAAAGGACACTTGAAGAGAAAGTTCATCAAAGAATGTTGGGTTTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGCACCTTAGAGGAGTTGCCAAAAGGTGCATTTGTGTGTGAGTTTGTGGGAGAAATATTAACCGTCAAAGAGTTGCATGAGAGGAACAGTAAATGTGCCCAAAATGGAACTCCCACATACCCAGTTCTATTAGATGCAGATTGGGATTCAGGAGCTATAAATGACAAAGAAGCTCTTTGTTTGGATGCAGCATCTTATGGGAATATTGCTAGGTTTATAAATCACAGAAAAGTAGCGCCGCTAGAAGAGCTAACTTGGGTAAGTAGTTTGGGTTTTATAATACGGTGTTTGGATTACGGTATTGACTTTGATGACAATGAGGGTCCTGTCAAGCCATTTTCTTGTAAATGCGGCAGCAAGTTCTGCAGGAAAATGGAGCGATCAAATAGTAAGTCCCAAACGTATCATCAAAATTGTCCACATCTATTTCACATTAACTTTGAACCTTTATGTTCTTCTTCACGAGTTAAGCTTTGGCGCTTGGCTTTATTTCCTGAAACCGTTCCAGATCACAGAATCACATGA 2208 0.4153 MHNFLDLTSIAVGTCSGLSNNQEQDMEDEEAHVQDEPVRPLKRLRLRGHENQASDPLSICGTSSSASPSKMPKVEDYELPQQPQYKAISPRPNRNAETEDRPAPVQDSIVEKGKQRVSGQAAPGGRRQLVSERLSPSVPLKEPTAEQRIVVSPKNRLPSTYALILPKDEPIDELADYDAPLATIYPGILLVFPDANFIHFWNHLYRGRSEGIRDSSDEANHEVVANRECSIVEIASSTSGEVKITMSCSSALGRSDFRLPSRDQLLKKMEDKCLQSYNITDPNFSIMKMLRDMCDCMLEFRTDSNDDSQEGSEMIPSLNVMKESRTRDAGMSNGSINIQSSSALDASHISISPPVMTGMNNTVLVTNKARSDFPGCDDGKGLEDPVSSHSGSLVVVQQHQLTPDDLRSLHGADDLSKGEENLRIPWVNEITNDFPPPFHYLHQSIAFRDAYVNWCLSKIKCEDCCSTCLGDCLQSPTPCVCANKIEGGYAYTSEGLLKEKFLEECITISRNPERHQFYCQICPFERAKNDDCLEPCKGHLKRKFIKECWVFFTSEGKGWGLRTLEELPKGAFVCEFVGEILTVKELHERNSKCAQNGTPTYPVLLDADWDSGAINDKEALCLDAASYGNIARFINHRKVAPLEELTWVSSLGFIIRCLDYGIDFDDNEGPVKPFSCKCGSKFCRKMERSNSKSQTYHQNCPHLFHINFEPLCSSSRVKLWRLALFPETVPDHRIT 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1553 735 MobiDBLite consensus disorder prediction 93 107 - -
Mibi02g1553 735 SUPERFAMILY SET domain 421 685 IPR046341 -
Mibi02g1553 735 SMART preset_2 412 553 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi02g1553 735 ProSiteProfiles SET domain profile. 547 735 IPR001214 GO:0005515
Mibi02g1553 735 Pfam SET domain 558 637 IPR001214 GO:0005515
Mibi02g1553 735 SMART set_7 547 667 IPR001214 GO:0005515
Mibi02g1553 735 Gene3D SET domain 404 687 IPR046341 -
Mibi02g1553 735 MobiDBLite consensus disorder prediction 55 70 - -
Mibi02g1553 735 MobiDBLite consensus disorder prediction 32 50 - -
Mibi02g1553 735 MobiDBLite consensus disorder prediction 18 141 - -
Mibi02g1553 735 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 637 693 - -
Mibi02g1553 735 Pfam Pre-SET motif 416 549 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1553 Mibi-ChrMibi02 15432049 15436333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1553 532 636 C2H2 Transcription Factor Family AT2G23740 37.383 1.08e-14 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi02g1553 Pre-SET 1.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1553 02 15432049 15436333 Mibi02g1553 02 15432049 15436333 ECH