LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g1545	ATGCAGGGTGCTTGTACTGTGTCAAAGGAAGAAACTTTGGTGATGTCTTCGGAGGATTCTTCATCCCCAGATGAGTCTGAGCTTGAATTGGGTCTTGCCTTAAGCCTTTCTCGTCCTCCTCACCTCAAGTCTCTACCACTTTCCATGAATCATCATGCTAGAATTTTAACTGCTAAAGATTTCCCTTCTCTGGTTTCTTCTCCTTCTGCAACTTCATTAGCCTCATCAACTTCCTCCTCATCTCCTTCCTCTGTGACCAGACCTAACGCCACTTCTGGCATTAAGAGGACTGTCGATTCTGTTGTTGCTACTAACGGCCCCAGCCAGGTTGTAGGATGGCCTCCTGTTGGAGCATTTCGAATGAATAGCTTTAACAACCATGCAAAGTCACCTGCCACGAATGTGTTCAACTCAGTGACTGAGAGAAGTAAGAGCAGCAATACAGAGGCTGGGAAGAGTAATGATAACGGTGTCGATAATAACATTGTTAGTGCCAAAGGTAAAGGGCACCTGAAGAGTTCCTGGTTTGTGAAGGTAAATATGGATGGGTTACCAATTGGAAGGAAGGTTGATTTGAGCGCTCATAATTCCTATGAAAGCTTAGCACTTACTTTGGAGGAGATGTTCGATGAGCACACTGCAGCTGTTTCTACTAAAAGATCAAATGGGGAAGAACGTGGCGTTACAGTCAGACCAGTAAGATGGTCAAAATTGCTGGATGGATCTTGCAAGTTTGTACTTACTTATGAAGACAGGGAAGGAGACTGGATGCTTGTTGGAGATGTACCTTGGGGGATGTTTCTAAGCTCTGCGAGGAGGTTAAGAATCATGAAAACATCTGAGGCTAATGGACTGGCACCAAAATGTGAAGAAAGGAACAGCAGACACAGAAGTTAG	897	0.4459	MQGACTVSKEETLVMSSEDSSSPDESELELGLALSLSRPPHLKSLPLSMNHHARILTAKDFPSLVSSPSATSLASSTSSSSPSSVTRPNATSGIKRTVDSVVATNGPSQVVGWPPVGAFRMNSFNNHAKSPATNVFNSVTERSKSSNTEAGKSNDNGVDNNIVSAKGKGHLKSSWFVKVNMDGLPIGRKVDLSAHNSYESLALTLEEMFDEHTAAVSTKRSNGEERGVTVRPVRWSKLLDGSCKFVLTYEDREGDWMLVGDVPWGMFLSSARRLRIMKTSEANGLAPKCEERNSRHRS	298

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mibi02g1545	298	MobiDBLite	consensus disorder prediction	66	92	-	-
Mibi02g1545	298	MobiDBLite	consensus disorder prediction	1	30	-	-
Mibi02g1545	298	MobiDBLite	consensus disorder prediction	139	160	-	-
Mibi02g1545	298	Pfam	AUX/IAA family	77	288	IPR033389	-
Mibi02g1545	298	FunFam	Auxin-responsive protein	169	289	-	-
Mibi02g1545	298	MobiDBLite	consensus disorder prediction	1	21	-	-
Mibi02g1545	298	Gene3D	-	170	291	-	-
Mibi02g1545	298	PANTHER	AUXIN-RESPONSIVE PROTEIN IAA17	26	284	IPR003311	GO:0005634\|GO:0006355
Mibi02g1545	298	SUPERFAMILY	CAD & PB1 domains	171	278	-	-
Mibi02g1545	298	ProSiteProfiles	PB1 domain profile.	174	279	IPR000270	GO:0005515

Showing 1 to 10 of 10 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g1545	Mibi-ChrMibi02	15378676	15381378	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g1545	178	288	B3 DNA Binding Superfamily	AT1G59750	35.135	1.29e-12	66.2

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	AUX/IAA	Mibi02g1545		AUX_IAA	7.7e-60	CL0072

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi02g1545	02	15378676	15381378	Mibi06g2368	06	43920960	43923595	CCT
	Mibi02g1545	02	15378676	15381378	Mibi02g1545	02	15378676	15381378	ECH

Showing 1 to 2 of 2 entries