Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1545 ATGCAGGGTGCTTGTACTGTGTCAAAGGAAGAAACTTTGGTGATGTCTTCGGAGGATTCTTCATCCCCAGATGAGTCTGAGCTTGAATTGGGTCTTGCCTTAAGCCTTTCTCGTCCTCCTCACCTCAAGTCTCTACCACTTTCCATGAATCATCATGCTAGAATTTTAACTGCTAAAGATTTCCCTTCTCTGGTTTCTTCTCCTTCTGCAACTTCATTAGCCTCATCAACTTCCTCCTCATCTCCTTCCTCTGTGACCAGACCTAACGCCACTTCTGGCATTAAGAGGACTGTCGATTCTGTTGTTGCTACTAACGGCCCCAGCCAGGTTGTAGGATGGCCTCCTGTTGGAGCATTTCGAATGAATAGCTTTAACAACCATGCAAAGTCACCTGCCACGAATGTGTTCAACTCAGTGACTGAGAGAAGTAAGAGCAGCAATACAGAGGCTGGGAAGAGTAATGATAACGGTGTCGATAATAACATTGTTAGTGCCAAAGGTAAAGGGCACCTGAAGAGTTCCTGGTTTGTGAAGGTAAATATGGATGGGTTACCAATTGGAAGGAAGGTTGATTTGAGCGCTCATAATTCCTATGAAAGCTTAGCACTTACTTTGGAGGAGATGTTCGATGAGCACACTGCAGCTGTTTCTACTAAAAGATCAAATGGGGAAGAACGTGGCGTTACAGTCAGACCAGTAAGATGGTCAAAATTGCTGGATGGATCTTGCAAGTTTGTACTTACTTATGAAGACAGGGAAGGAGACTGGATGCTTGTTGGAGATGTACCTTGGGGGATGTTTCTAAGCTCTGCGAGGAGGTTAAGAATCATGAAAACATCTGAGGCTAATGGACTGGCACCAAAATGTGAAGAAAGGAACAGCAGACACAGAAGTTAG 897 0.4459 MQGACTVSKEETLVMSSEDSSSPDESELELGLALSLSRPPHLKSLPLSMNHHARILTAKDFPSLVSSPSATSLASSTSSSSPSSVTRPNATSGIKRTVDSVVATNGPSQVVGWPPVGAFRMNSFNNHAKSPATNVFNSVTERSKSSNTEAGKSNDNGVDNNIVSAKGKGHLKSSWFVKVNMDGLPIGRKVDLSAHNSYESLALTLEEMFDEHTAAVSTKRSNGEERGVTVRPVRWSKLLDGSCKFVLTYEDREGDWMLVGDVPWGMFLSSARRLRIMKTSEANGLAPKCEERNSRHRS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1545 298 MobiDBLite consensus disorder prediction 66 92 - -
Mibi02g1545 298 MobiDBLite consensus disorder prediction 1 30 - -
Mibi02g1545 298 MobiDBLite consensus disorder prediction 139 160 - -
Mibi02g1545 298 Pfam AUX/IAA family 77 288 IPR033389 -
Mibi02g1545 298 FunFam Auxin-responsive protein 169 289 - -
Mibi02g1545 298 MobiDBLite consensus disorder prediction 1 21 - -
Mibi02g1545 298 Gene3D - 170 291 - -
Mibi02g1545 298 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 26 284 IPR003311 GO:0005634|GO:0006355
Mibi02g1545 298 SUPERFAMILY CAD & PB1 domains 171 278 - -
Mibi02g1545 298 ProSiteProfiles PB1 domain profile. 174 279 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1545 Mibi-ChrMibi02 15378676 15381378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1545 178 288 B3 DNA Binding Superfamily AT1G59750 35.135 1.29e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi02g1545 AUX_IAA 7.7e-60 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1545 02 15378676 15381378 Mibi06g2368 06 43920960 43923595 CCT
Mibi02g1545 02 15378676 15381378 Mibi02g1545 02 15378676 15381378 ECH