Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1544 ATGCTAAGCTTCTCTTACACCTTCTCTTCGCTTCACGCCCTCAAGATTGGATCCATATGGGCCTCAATCATCAAAAAGATTCAATCTTTGAAAAGAAAGGCAGAAAGAGCAAAAAAGATAAAAGAAAGGATTTTTATCTCAGATGTGGCAATTAGTGGGTTCAGACTTTCAGAGTCTCAGACCATGATTGATAATGCGCAGCCCATGAAGTTTGTGACTTATGTTGTAGATGAAGCTCTAGGCATTCCAATAGCTCATACATTAGATAGCAAATGGTGGACAACTGAGAGATTAAGTATAGTGAAGAAGAACAAGATGCAACTGAAAATTCTGCTCTTCTTCTGTTACATGTTCTGTTTCTCTTATGGTCTTGCTGCTGTTTTGAATGATGAAGTTTCTGCTCTGCTTTCTATAAAAGCAGGTCTTATTGATCCGTTGAATAAGCTGCAAGATTGGAAATTGCGGGACAATGCACCAAGAAAAGATGCAGCGCATTGTAACTGGGTTGGTGTCTCGTGCAATGCTGCTGGAGCAGTTGAGAAGCTTGATCTATCCCACATGAATCTCAGTGGCAAGGTATCGGATGAGATACAAAAGCTACAAAGTCTCACTACTCTAAACTTATGCTGCAATGGATTCTCCACAACACTGCCAAAATCTGTAGCCAATCTCACCACATTGAGAAGTCTTGATGTCAGCCAGAATTTCTTCATTGGTGATTTTCCATCAGGTCTTGGAAAGGCATCACGACTTATGATTTTAAATGCATCAGGTAATGATTTCACAGGTTTTGTTCCTGAGGACCTTGGAAATTCTTCTTTCCTAGAGATGCTGGATCTCAGAGGCAGCTTCTTCCAAGGGTCTATTCCAAAATCTTTCAGTAGATTGCTGAAGTTGAGTTTCCTTGGTCTTTCTGGAAATAATCTCACGGGAGAAATTCCAGGAGACCTGGGACAGCTTTCCTCACTGGAGTATATGATTCTCGGGTACAATGCATTTGAGGGTGGGATTCCCAGAGAGTTTGGAAATCTCACCAATCTCAAGTATCTTGATATGGCCGAAGGCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTTAACACAGTTTTCTTGTACAGAAACAATTTCAAAGGTGAAATCCCTCCTTCTTTCGGCAACCTGACTTCGTTGGTGTTGCTGGATTTCTCTGATAACATGCTATCAGGAAAAATTCCGCCTGAAATTGGTCAACTGAAGCATCTAGAGCTCCTAAATTTCATGAGCAACCTTCTTTCTGGCCCTGTGCCTTCTGAACTTGGGGATTTGCCTCAATTGAAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGAACATTGCCAAATCACCTGGGCAAGAGTTCACCATTGCAGTGGCTTGATGTATCATCCAACTCTCTCTCTGGTGGAATTCCAGAAACACTTTGCAGCCAGGGCAATCTCACCAAGCTGATCCTTTTCAGTAATGCCTTCACAGGTCCAATCCCAATCAACCTATCATCGTGTCCTTCACTAGTTCGTGTTCGAATTCATAACAATTTGCTTAATGGAACGATTCCAGTCGGTTTTGGGAAACTTGTGAATCTTGAAAGGTTAGAATTGGCTAACAACAGTCTCACTGGTGAAATTCCGAATGACATTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCCACTGTACTTTCCACTCCAAATCTTCAATCATTCATGGTCTCCCACAACAATTTGGAAGGTGAAATCCCGGACCAATTTCAGGACTGTCCTTCACTCGGTGTTCTTGATCTCTCATCAAATCGTCTCTCTGGAAGCGTCCCAGCTAGCATTGCTTCTTGTCAGAAATTGGTAAACTTGAACCTAAAGAACAACCAATTGACTGGTAAAATCCCGAAGGCACTTGCCAACATGCCTTCGTTGGCCGTCGTTGATTTTTCCAACAACTCTCTGATCGGTGAAATACCTGATAGCTTTGGCATTTCTCCTGCTCTGGAGGCTCTCAATTTCTCGTACAACAAGCTTGAGGGTCCTGTCCCAACAAATGGCATGCTGAGAACCATTAACCCAAGTGATCTTGTGGGTAATGCTGGCCTATGTGGTGGCGTCCTTCCTCCATGTGGCCAAAAGTCTGCATATGCATTGAAGCATGGAAGCTCACGAGCAAAACACATAATCACTGGATGGGTCATTGGAATATCATCAGTCTTGGCTATTGGGATTGCCATTTTTGTTGCTAGATCTGTATACGCAAGGTGGTACTCTCATGGCTTCTGCATGGGAGAAAATATTTATAAGGGTGACAAAAGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAACTACTGAAATTCTTGCTTGCATCAAGGAAACAAATGTCATTGGAATGGGAGCAACTGGTGTTGTTTATAAGGCTGAAGTATCGCAGTCAAACACAGTTGTGGCAGTGAAGAAGTTGTGGAAATCAGGATCTGATACTGAAGTAGGAAGTAGTGATGACCTTGTTGGAGAGGTGAATGTCTTGGGTAGGCTAAGACATAGAAATATCGTCAGACTATTAGGATATCTTTATAATGACATTGATGTTATGATAGTTTATGAATTCATGTCTAATGGCAACCTTGGAGATGCCTTGCATGGCAAACACGCCGGAAGGTTGCTTGTAGACTGGGCTTCCCGTTATAAGATAGCCCTAGGAGTTGCACAAGGGCTTGCTTATCTTCATCATGACTGTCATCCACCAGTCATCCACCGAGACATCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTAGCCAAAATGATGATCAGGAAGAACGAAACAGTCTCCATGATTGCCGGGTCCTACGGCTACATTGCCCCAGAATATGGATATACCTTGAAGGTGGATGAAAAGATCGACACTTACAGCTATGGAGTAGTTCTGTTAGAGCTTCTAACAGGGAAGAGGCCACTGGATTCTGAGTTTGGAGAATCAGTGGACATTGTTGAGTGGATTAGGAGGAAGATTAGAGACAACAAGCCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACTGCAGGCATGTTGTGGAGGAGATGCTTTTAGTTCTTAGAATAGCACTTCTTTGCACTGCCAAGCTACCCAAAGACAGACCCTCCATGACAGATGTGATAATGATGCTTGAAGAGGCAAAGCCTCGGAGTAAAAGCGATAGCAACAACCAAAAACATGAAGCTAATAATAAGATGATGATGCCAGTTTTTAGCACATCATCACCAGTTAGTGGCCTTGTGTAG 3372 0.4262 MLSFSYTFSSLHALKIGSIWASIIKKIQSLKRKAERAKKIKERIFISDVAISGFRLSESQTMIDNAQPMKFVTYVVDEALGIPIAHTLDSKWWTTERLSIVKKNKMQLKILLFFCYMFCFSYGLAAVLNDEVSALLSIKAGLIDPLNKLQDWKLRDNAPRKDAAHCNWVGVSCNAAGAVEKLDLSHMNLSGKVSDEIQKLQSLTTLNLCCNGFSTTLPKSVANLTTLRSLDVSQNFFIGDFPSGLGKASRLMILNASGNDFTGFVPEDLGNSSFLEMLDLRGSFFQGSIPKSFSRLLKLSFLGLSGNNLTGEIPGDLGQLSSLEYMILGYNAFEGGIPREFGNLTNLKYLDMAEGNLGGEIPAELGNLKLLNTVFLYRNNFKGEIPPSFGNLTSLVLLDFSDNMLSGKIPPEIGQLKHLELLNFMSNLLSGPVPSELGDLPQLKVLELWNNSLSGTLPNHLGKSSPLQWLDVSSNSLSGGIPETLCSQGNLTKLILFSNAFTGPIPINLSSCPSLVRVRIHNNLLNGTIPVGFGKLVNLERLELANNSLTGEIPNDIASSTSLSFIDFSRNNLHSSLPSTVLSTPNLQSFMVSHNNLEGEIPDQFQDCPSLGVLDLSSNRLSGSVPASIASCQKLVNLNLKNNQLTGKIPKALANMPSLAVVDFSNNSLIGEIPDSFGISPALEALNFSYNKLEGPVPTNGMLRTINPSDLVGNAGLCGGVLPPCGQKSAYALKHGSSRAKHIITGWVIGISSVLAIGIAIFVARSVYARWYSHGFCMGENIYKGDKRWPWRLMAFQRLNFTTTEILACIKETNVIGMGATGVVYKAEVSQSNTVVAVKKLWKSGSDTEVGSSDDLVGEVNVLGRLRHRNIVRLLGYLYNDIDVMIVYEFMSNGNLGDALHGKHAGRLLVDWASRYKIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYTLKVDEKIDTYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRIALLCTAKLPKDRPSMTDVIMMLEEAKPRSKSDSNNQKHEANNKMMMPVFSTSSPVSGLV 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1544 1123 Pfam Protein kinase domain 812 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1544 1123 FunFam Leucine-rich repeat receptor protein kinase EMS1 385 468 - -
Mibi02g1544 1123 Pfam Leucine rich repeat N-terminal domain 129 174 IPR013210 -
Mibi02g1544 1123 MobiDBLite consensus disorder prediction 1102 1123 - -
Mibi02g1544 1123 ProSiteProfiles Protein kinase domain profile. 810 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1544 1123 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 469 729 - -
Mibi02g1544 1123 Gene3D Ribonuclease Inhibitor 373 437 IPR032675 -
Mibi02g1544 1123 Gene3D Ribonuclease Inhibitor 298 372 IPR032675 -
Mibi02g1544 1123 FunFam MDIS1-interacting receptor like kinase 1 895 1105 - -
Mibi02g1544 1123 Gene3D Ribonuclease Inhibitor 438 732 IPR032675 -
Mibi02g1544 1123 SUPERFAMILY L domain-like 410 727 - -
Mibi02g1544 1123 FunFam MDIS1-interacting receptor like kinase 1 810 894 - -
Mibi02g1544 1123 ProSitePatterns Protein kinases ATP-binding region signature. 816 840 IPR017441 GO:0005524
Mibi02g1544 1123 Pfam Leucine rich repeat 585 645 IPR001611 GO:0005515
Mibi02g1544 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Mibi02g1544 1123 Pfam Leucine Rich Repeat 538 557 IPR001611 GO:0005515
Mibi02g1544 1123 SUPERFAMILY L domain-like 128 407 - -
Mibi02g1544 1123 Gene3D Transferase(Phosphotransferase) domain 1 895 1114 - -
Mibi02g1544 1123 SMART LRR_typ_2 440 464 IPR003591 -
Mibi02g1544 1123 SMART LRR_typ_2 536 560 IPR003591 -
Mibi02g1544 1123 SMART LRR_typ_2 608 632 IPR003591 -
Mibi02g1544 1123 SMART LRR_typ_2 392 416 IPR003591 -
Mibi02g1544 1123 SMART LRR_typ_2 296 320 IPR003591 -
Mibi02g1544 1123 SMART LRR_typ_2 200 224 IPR003591 -
Mibi02g1544 1123 SUPERFAMILY Protein kinase-like (PK-like) 801 1087 IPR011009 -
Mibi02g1544 1123 SMART serkin_6 810 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1544 1123 MobiDBLite consensus disorder prediction 1088 1123 - -
Mibi02g1544 1123 Gene3D Phosphorylase Kinase; domain 1 810 894 - -
Mibi02g1544 1123 Gene3D Ribonuclease Inhibitor 128 292 IPR032675 -
Mibi02g1544 1123 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 284 384 - -
Mibi02g1544 1123 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 128 283 - -
Mibi02g1544 1123 PANTHER RECEPTOR-LIKE PROTEIN 55 537 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1544 Mibi-ChrMibi02 15370923 15375960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1544 106 1123 Receptor kinase-like Gene Family AT1G08590 57.803 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi02g1544 Pkinase 9e-47 CL0016