Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1532 ATGATTGTATGGAATGGAATCAAGAAAGTTAATCGTTTTCTTCATGATTGTATGTTCACTGATCATTTTTCCAGCTCCAGAGATCAATTCCGTACAAGAATAAGAGCGAGAGTTATTTTACGGATCACAAATGAGAATGACGACCGTTGCTGTGAATGCGACGCCGGTCGCCATGTCGTTAGCAAGGGTGTGAACCTTGAGGCTCAAGGAGATAGAAAGTTTGATGGTGGTGGGGATTGTTCGGCTGCAAATATAAGGATGCTGCTGATCTCTTCGAAAAAGCCGCCAATTCCTACAACCTTGCTAAAGCATGGGGTAGAGCCACCAAGTTGGCGAATTATTACTCAGGGTGGAAAGCTAAGCATAAAGAAGGCCAAGGTTATATATTTTAAGGAAATTGCTGAGTTGCATGAGTCTGAACAGGACATTGAGGAGGCTATTGTTTACTATGAAAAAGCAGCTGATATTTTTGCAAATGAAGAGGTGACAACTTCTGCTAACCAGTGCAAGCAAAAAGTTGCTCAGTTAGCTGCTCAGCTTGGACAATATCAGAGGGCCGTAGAGATTTATGAACAAATAGCCCGCCAGTCTCTGAACAATATGTTGTTGATGTATGGAGTTGCAGGGCATCTTTTTAATGCTGGCATTTGCCAACTGTGTAGAGGTGATGTTGCTGTAATCAACAATGCACTAAGGCGATATCAGGAATTGGTTCCAACATTTTCAGGAACACGGGAATGCATTTACTTCAAAAATAGTGGCTGCCTTAAAGGTTTTAGTGATCGAAGATTTGCCAGTTCTTCATGTAGCCTCATTGCTCTTTCTAGTTCGCTTAAATGGAACTGGTGTCTTAAATCTATTCTCTAAATGTCTAATCCTGAAGTACTGAATCCTTTCACAAAGCTTCCACATTTATATGATGACCATATGGTGGCTCAATACAAGGGGGCTGCTTTGGGTGATCTGACTCCTCATCCCTTTGCTGTTGCAGATGCTGCATATAGATGCAACTTCAGTTTAAATAAACTAAAGCACTGCTTGAAAAGGAGGGTGAAGCTGGTAAAAGGGAAGCCAAAATTGTACCTGTTATTCAAGGAGTTCCAGTTATTGACCATGCATTGTTGGAGAAGCTTACTACCGAAAACCAGAAACTTAAAGAATCTGTTACAAATCTTGATATTAAAAGATGGGAAGAGAAAATCCCAGATACAGAATCTCGAAACCAAATTCTGCAATACCGATCTCCGACAAAGCTCGTCAGTGGAAAATATGTTTGAGCAAATCACAATTCCAGTAGTGGAGGAGAATGTTGATACTTTAATAAACTGTGTTACTAAGAACATTGGGTTCAGTAATGGACAGCATGCAGCTGCCATTACCAGTTACCAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGGACTAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGGTAACTGATTACTCCGCTCTGAATTATGCTGTGTGA 1509 0.4076 MIVWNGIKKVNRFLHDCMFTDHFSSSRDQFRTRIRARVILRITNENDDRCCECDAGRHVVSKGVNLEAQGDRKFDGGGDCSAANIRMLLISSKKPPIPTTLLKHGVEPPSWRIITQGGKLSIKKAKVIYFKEIAELHESEQDIEEAIVYYEKAADIFANEEVTTSANQCKQKVAQLAAQLGQYQRAVEIYEQIARQSLNNMLLMYGVAGHLFNAGICQLCRGDVAVINNALRRYQELVPTFSGTRECIYFKNSGCLKGFSDRRFASSSCSLIALSSSLKWNWCLKSILXMSNPEVLNPFTKLPHLYDDHMVAQYKGAALGDLTPHPFAVADAAYRCNFSLNKLKHCLKRRVKLVKGKPKLYLLFKEFQLLTMHCWRSLLPKTRNLKNLLQILILKDGKRKSQIQNLETKFCNTDLRQSSSVENMFEQITIPVVEENVDTLINCVTKNIGFSNGQHAAAITSYQCLLHWKSFEAERTSVFDRLIQMIGSAIEVTDYSALNYAV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1532 502 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 129 248 IPR000744 GO:0006886
Mibi02g1532 502 Pfam Soluble NSF attachment protein, SNAP 129 251 - -
Mibi02g1532 502 SMART tpr_5 127 160 IPR019734 GO:0005515
Mibi02g1532 502 SMART tpr_5 167 200 IPR019734 GO:0005515
Mibi02g1532 502 Gene3D Kinesin motor domain 294 358 IPR036961 -
Mibi02g1532 502 Gene3D Tetratricopeptide repeat domain 110 253 IPR011990 GO:0005515
Mibi02g1532 502 PRINTS NSF attachment protein signature 198 217 IPR000744 GO:0006886
Mibi02g1532 502 PRINTS NSF attachment protein signature 167 190 IPR000744 GO:0006886
Mibi02g1532 502 PRINTS NSF attachment protein signature 239 259 IPR000744 GO:0006886
Mibi02g1532 502 PRINTS NSF attachment protein signature 134 151 IPR000744 GO:0006886
Mibi02g1532 502 Coils Coil 166 186 - -
Mibi02g1532 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 295 342 IPR027417 -
Mibi02g1532 502 SUPERFAMILY TPR-like 129 251 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1532 Mibi-ChrMibi02 15242008 15246708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1532 380 494 Myosins gene family AT1G04160 48.696 8.73e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1532 02 15242008 15246708 Mibi06g2345 06 43711165 43726446 CCT
Mibi02g1532 02 15242008 15246708 Mibi02g1532 02 15242008 15246708 ECH