Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1519 ATGGATGATGATGAATATCCGATGCCCTCTGGCTTGCCCCGCCAAAAGAAGCCCTCCGCGCCTGAGGACGATATCATGGAGCTATTGTGGCAGAACGGCCAGGTGGTGATGCAGAGCCAGAATCAACGGCCTCAGAGAAAACCGCCTCCAGATACTGTAATTCCAGCCGCAAGGGAGATTCGACCCTCTCAACAACAACAATTCGAACCAAACTATCAGAATCAACAACAACACATCTTTATGCAAGAAGATGAAATGATTTCCTGGCTTCACTATCCCATGGTAGACGATCCTCCCTTGGATCACAACTTCTGCGCCGACATCCTCTACCCTCACCCTCACCCTCACCCTCAGCTTCTCACTGCCAACAACAACAACAACAGTTCCATACAAAATCCTGACCGTACAACGGAGCTCCGGCAGACATCAAGGTCGGTCGCTCAACGGCCGCCGATTCCACCGCCGAGGAAGCCGGAGCAGGTGCAGGCGATGATACCGAACTTCCCGCACTTCTCGAAGCACAATGCGAGAGTTGAAGCAGGACCGTCGAGTTCGAGGTCGGCGATGAAGGAATCGACGGTGGTGGATTCGTGTGAGACTCCGGCGTTGATGGCGGCGTCGGCTTCCAGAGTATCGGAGACTTTCAGAAACACGGCTGAGCCAACAGAGAGGGATGAGGCTCCCGGAACCATGAGCACCGCAGGGGAGGCGGCGGCGCCGTCGTCGACGTCGGTCGGCGGAGATACTGGATTCAGGGAGACGACGACCACGTGCGAGATGATGGCCACGTCATCGCCGGGAGGTTCGAGTGGTGGTGGTGAAGTGGTGAGGAGACCGGCGGCGGAAGATCTGAAAAGGAAGGGACGGGAAGGCGATGAATCGGAGTGTCACAGCGAGGATGTTTATGTCGAATCTGCTGAAGCCAAGAAGCAAAATTGTGGATCATCATCTACTAAAAGATCACGTGCTGCGGAGGTTCATAATCTCTCTGAGAGGAGGCGTCGAGATAGGATTAATGAAAAGATGAGAGCCTTGCAAGAACTTATCCCTCGCTGCAATAAGTCTGACAAAGCTTCAATGCTGGATGAAGCAATTGAATACTTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCTATGGGATGTGGGATGGTACCAATGATGTTTCCCGGAATCCAACAGTATATGCCGCCAATGGGGATGGGGATGGGGATGGGGATGGGAATGGGGATGGGGATGGAAATGGGGATGAACAGGCCATTAATGCCATTTCCCAATATGTTGGCTGCTTCTGCTATGCCACAGGCGGCGGCAGCTCAATTGGGACCAAGATTCCCTATGCCCCCTTTCCAAATGCCTCATGCCCCTCAGCCTGATCCATCCAGAATGCAAGCAGCGGCTCCAAATCAACCAGAAAATAATACGCTTCCTTCTCTTGTCACACCTGATCCCAATCAATTGCGGATCCCAAACTTCAGTGATCCTTATCAGCAAGGCCTTGGTCCCCACCACCAGATGCATCTACAGTTCATGCAGAATCAGGTAATGAACAATCCAACTGTCGGCAAGCCAAGTTCCAGTCAGAGCCACGGGAATGCAGAAAATAATCAACCAGGTCAACCAGAGTAA 1629 0.5242 MDDDEYPMPSGLPRQKKPSAPEDDIMELLWQNGQVVMQSQNQRPQRKPPPDTVIPAAREIRPSQQQQFEPNYQNQQQHIFMQEDEMISWLHYPMVDDPPLDHNFCADILYPHPHPHPQLLTANNNNNSSIQNPDRTTELRQTSRSVAQRPPIPPPRKPEQVQAMIPNFPHFSKHNARVEAGPSSSRSAMKESTVVDSCETPALMAASASRVSETFRNTAEPTERDEAPGTMSTAGEAAAPSSTSVGGDTGFRETTTTCEMMATSSPGGSSGGGEVVRRPAAEDLKRKGREGDESECHSEDVYVESAEAKKQNCGSSSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPPMGMGMGMGMGMGMGMEMGMNRPLMPFPNMLAASAMPQAAAAQLGPRFPMPPFQMPHAPQPDPSRMQAAAPNQPENNTLPSLVTPDPNQLRIPNFSDPYQQGLGPHHQMHLQFMQNQVMNNPTVGKPSSSQSHGNAENNQPGQPE 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1519 542 MobiDBLite consensus disorder prediction 463 487 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 118 147 - -
Mibi02g1519 542 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 325 400 IPR036638 GO:0046983
Mibi02g1519 542 Gene3D - 317 380 IPR036638 GO:0046983
Mibi02g1519 542 MobiDBLite consensus disorder prediction 206 248 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 1 22 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 515 542 - -
Mibi02g1519 542 SMART finulus 328 377 IPR011598 GO:0046983
Mibi02g1519 542 MobiDBLite consensus disorder prediction 174 194 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 307 333 - -
Mibi02g1519 542 Pfam Helix-loop-helix DNA-binding domain 326 372 IPR011598 GO:0046983
Mibi02g1519 542 PANTHER TRANSCRIPTION FACTOR PIF3 14 474 IPR044273 GO:0003700|GO:0006355
Mibi02g1519 542 MobiDBLite consensus disorder prediction 178 194 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 116 160 - -
Mibi02g1519 542 FunFam Basic helix-loop-helix transcription factor 317 380 - -
Mibi02g1519 542 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 371 IPR011598 GO:0046983
Mibi02g1519 542 CDD bHLH_AtPIF_like 322 385 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 309 323 - -
Mibi02g1519 542 MobiDBLite consensus disorder prediction 441 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1519 Mibi-ChrMibi02 15093553 15098611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1519 12 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 39.637 2.85e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g1519 HLH 2e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1519 02 15093553 15098611 Mibi02g1519 02 15093553 15098611 ECH