Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1508 ATGGCGGCGGCGAGGCGTCTCCGGGACCTTCAAGCCCAAGCGGGAAATAAGATCTGTGTTGATTGCTCTCAGAAGAATCCCCAGTGGGCTTCCGTTTCCTATGGAGTTTTCATGTGCTTGGAATGCTCCGGCAAGCACCGTGGCCTAGGTGTCCACATCTCCTTCGTCCGATCCGTCACCATGGATTCGTGGTCCGAAATTCAGATAAAGAAGATGGAATCAGGTGGTAACGACAAACTCAACGCCTTTCTCGCTCAATATGGTGTCGCCAAGGAGACCGATATTGTCGCTAAGTATAATACTAACGCCGCTAGCATTTATAGGGATCGAATTCAGGCTCTTGCTGAGGGACGGCCATGGCGGGACCCACCGGTTGTGAAGGAGAGCGTTGGCCATGGGAAGAGTAGTAAGCCTCCGTTGCCTAAAACTGGGAATGATGGAGGTTGGGATAGTTGGGATAATGATGACGTGGCCAGATCTCCTCATGACTTCAAGCGTAATATGTCTACTGGAGATGTGAGGGGTTTCAACGGAGGATCGAACGGTGGTAGGCCTTCGAGATCGAGATCGACGGAGGATATTTATACGAGGTCGCAATTGGAGGCTTCTGCTGCCGACAAGGACAATTTTTTCGCTCGTAAGCGTGCTGAGAATGAATCACGACCTGAAGGGGTTCCTCCCTCGCAAGGAGGCAAGTATGTTGGATTTGGATCTAGTCCTGCACCTCCTTCGCGGGTGAATAATCAACAAAACGATGTTTTTTCGGTTATGTCTCAGGGATTTGGTAAATTGTCTTTGGTTGCTTCCTCTGCGGCTCAGTCTGCTGCTAATGTTGTTCAGGCTGGCACTAAAGAGATCGCTACCAAGGTAAAGGATGGTGGCTATGATCACAGAGTCAATGAAACTGTCAATGTTGTGTCTCAGAAGACATCGGAGATAGGACAGAGGACGTGGGGGATTATGAAGGGGGTCATGGCTATGGCTTCGCAGAAGGTTGAGGAGTACACCAGGGATAACCCTAACTGGCCAACTGATAACTGGCAGCGAAATGAAAATGAAAGAAATGGCTATTATCAAGAATATAATCAACAAAATAATAAAGCTTGGAATTCTTCTTCTGGAGGAGGGCAACCTTCATCAGCTGGGCAGAACAATACTTACCAAAGAACCAGCTAA 1176 0.4864 MAAARRLRDLQAQAGNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMESGGNDKLNAFLAQYGVAKETDIVAKYNTNAASIYRDRIQALAEGRPWRDPPVVKESVGHGKSSKPPLPKTGNDGGWDSWDNDDVARSPHDFKRNMSTGDVRGFNGGSNGGRPSRSRSTEDIYTRSQLEASAADKDNFFARKRAENESRPEGVPPSQGGKYVGFGSSPAPPSRVNNQQNDVFSVMSQGFGKLSLVASSAAQSAANVVQAGTKEIATKVKDGGYDHRVNETVNVVSQKTSEIGQRTWGIMKGVMAMASQKVEEYTRDNPNWPTDNWQRNENERNGYYQEYNQQNNKAWNSSSGGGQPSSAGQNNTYQRTS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1508 391 SUPERFAMILY ArfGap/RecO-like zinc finger 5 108 IPR037278 -
Mibi02g1508 391 CDD ArfGap_ArfGap1 3 117 - -
Mibi02g1508 391 MobiDBLite consensus disorder prediction 118 248 - -
Mibi02g1508 391 ProSiteProfiles ARF GTPase-activating proteins domain profile. 4 120 IPR001164 GO:0005096
Mibi02g1508 391 MobiDBLite consensus disorder prediction 335 391 - -
Mibi02g1508 391 SMART arf_gap_3 4 120 IPR001164 GO:0005096
Mibi02g1508 391 MobiDBLite consensus disorder prediction 173 198 - -
Mibi02g1508 391 MobiDBLite consensus disorder prediction 152 169 - -
Mibi02g1508 391 Gene3D Arf GTPase activating protein 1 127 IPR038508 -
Mibi02g1508 391 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 1 387 IPR044519 GO:0005096|GO:0016192
Mibi02g1508 391 MobiDBLite consensus disorder prediction 207 221 - -
Mibi02g1508 391 FunFam ADP-ribosylation factor GTPase-activating protein 1 129 - -
Mibi02g1508 391 Pfam Putative GTPase activating protein for Arf 5 94 IPR001164 GO:0005096
Mibi02g1508 391 PRINTS HIV Rev interacting protein signature 56 77 IPR001164 GO:0005096
Mibi02g1508 391 PRINTS HIV Rev interacting protein signature 16 35 IPR001164 GO:0005096
Mibi02g1508 391 PRINTS HIV Rev interacting protein signature 35 52 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1508 Mibi-ChrMibi02 15010316 15013365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1508 5 87 C2H2 Transcription Factor Family AT4G21160 48.810 3.77e-22 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1508 02 15010316 15013365 Mibi02g1508 02 15010316 15013365 ECH