Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1501 ATGGCTTTCTTCTCTGGAATCCGCCGCCTCGTTCGCGATTCTTCTTCTCCCTCCTCGCCTCTCTTTTCGCAACTTACTTCGTTTCGTCTCAGCTCTACTCTCACGTCCCCCAGGCTTTTCGTCAGTGGTCTATCAAGACTGACAACTGATGAAAAACTAAAGGAAGTATTTGCTCCTTTTGGGCAGCTGGTTGAAGCTAAGGTCATAATTGATAGAATCTCTGGAAAATCCAAGGGATTTGGTTTTGTAACTTACGGAAGCATAGAAGATGCTGAAAAGGCCAAAGAAGGAATGAATGCTAAGTTTTTGGATGGATGGGTTATTTTTGTTGATCCTGCCAAACCGAGAGAACCAAAACCTCTGCAATCACAGCCTCAGCCCTCTGAAACAGGTTTTACTGTTAACAAGACAGTTGGATGGTGTGGATGA 429 0.4452 MAFFSGIRRLVRDSSSPSSPLFSQLTSFRLSSTLTSPRLFVSGLSRLTTDEKLKEVFAPFGQLVEAKVIIDRISGKSKGFGFVTYGSIEDAEKAKEGMNAKFLDGWVIFVDPAKPREPKPLQSQPQPSETGFTVNKTVGWCG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1501 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Mibi02g1501 142 Gene3D - 12 125 IPR012677 -
Mibi02g1501 142 SUPERFAMILY RNA-binding domain, RBD 36 127 IPR035979 GO:0003676
Mibi02g1501 142 SMART rrm1_1 38 111 IPR000504 GO:0003723
Mibi02g1501 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Mibi02g1501 142 PANTHER NUCLEOLAR PROTEIN 8 15 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1501 Mibi-ChrMibi02 14977529 14979923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1501 39 135 Eukaryotic Initiation Factors Gene Family AT3G16380 27.835 6.73e-08 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1501 02 14977529 14979923 Mibi02g1501 02 14977529 14979923 ECH