Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1489 ATGAAGAGGGAGAGAGATAACGAGAGCTTACTGGACCTGGCCAAATGCCTCGTGCTGCTTTCTCATCATCATCAAGCAAAGGTGGATAGTAGCAATTCAGAATATGAGTGCAAGACGTGCAAGAGAAAGTTCTCATCGTTTCAAGCACTTGGGGGGCACAGGGCTAGCCACAAGAGGCCGAAGCTGGTGGATGGGGAAGAAGACCTTAAAGAAGAGGCCAAATCCCTCAAGTTAGCCACCAAACCCAACACCCACGCTTGCTCCATTTGTGGGCTTGAGTTCTCATTGGGCCAAGCACTTGGTGGCCACATGAGAAAGCACAGAGCCCTTCCTCACCACCATCACAATACTGACCAAGTGGTGGCTAAAGTCCCTGTTCTTAAGAGATCCAATAGTACCAGGGTGTTTTGCTTGGACCTCAACTTGACCCCTCTCCAGAATGACTTTAATCTTTTGTTTTCCAATATGCCTCCTGCTTTCACTTGA 486 0.4856 MKRERDNESLLDLAKCLVLLSHHHQAKVDSSNSEYECKTCKRKFSSFQALGGHRASHKRPKLVDGEEDLKEEAKSLKLATKPNTHACSICGLEFSLGQALGGHMRKHRALPHHHHNTDQVVAKVPVLKRSNSTRVFCLDLNLTPLQNDFNLLFSNMPPAFT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1489 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Mibi02g1489 161 Pfam C2H2-type zinc finger 85 109 - -
Mibi02g1489 161 Pfam C2H2-type zinc finger 35 60 - -
Mibi02g1489 161 Gene3D Classic Zinc Finger 32 107 - -
Mibi02g1489 161 SMART c2h2final6 35 57 IPR013087 -
Mibi02g1489 161 SMART c2h2final6 85 107 IPR013087 -
Mibi02g1489 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 107 IPR013087 -
Mibi02g1489 161 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Mibi02g1489 161 PANTHER ZINC FINGER PROTEIN ZAT5 11 146 - -
Mibi02g1489 161 SUPERFAMILY beta-beta-alpha zinc fingers 35 107 IPR036236 -
Mibi02g1489 161 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1489 Mibi-ChrMibi02 14870138 14870623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1489 1 153 C2H2 Transcription Factor Family AT2G37430 46.108 1.75e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1489 zf-C2H2_6 5.5e-09 CL0361