Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1467 ATGGCTCATAAGCTGCCTTCAGAGCATTCCCCTCTGCCTCTGCTACCGCCTCTTGCAATAATGCCTCGCTACGATGATAAATACGGTGGTACCCGTCTATATGTGGGACGCTTGTCCTCTAGGACGCGTTCACGTGACCTGGACAAGGTCTTCGGCAGATACGGGAGAATTCGAGGTGTGGATATGAAGCATGATTACGCCTTTGTTGAATTTAGTGATCCCCGAGATGCAGATGATGCAAGATATAACTTAGATGGTCGTGACGTGGATGGAAGTCGCATCATTGTTGAATTTGCAAAAGGGGGTCCACGTGGTTCCCGAGAATACTTGGGTAGAGGTCCTCCTCCAGGATCTGGGCGCTGTTTTAACTGCGGTATTGATGGTCACTGGGCTCGGGATTGCAAAGCTGGTGACTGGAAGAATAAGTGTTACCGCTGTGGGGAAAGAGGTCATATAGAGCGAAACTGCAAGAATAGTCCCAAGAAAAGCAGCGGTCGTGGAAGAAGCTATTCTCGTTCACCTGTCAGGTCACGTTCTCCCCGTCGTGACAGGAGCCGGGATCGAAGTTACAGTCGGGATCGCAGCTACAGCCGTTCAAGATCCCCTGTCCGCAGAGAACGTAGCCCCGTTCGCGAAGATAGATCAGAGTCTCCTCGCTATAGAAGCCCAGAACCCAAGAATAGTCCACTATCTGCCAAGGCGAGGAACGATAGCCCTACTTATGATGAAGGCAATCAGCAGAAGGATAGAGGGAGCATGTCTCCCGAGAATGGCAGGCTGTCCGCCCGGCAAGATGGGTCTGACTATAGTGATGGTCCTAGAAGAAAGAGCAGAAGTAGAAGCCCTGCTAGTCCAAAAACTAATGGCAGTGGCCGCAGTGATAGTCCTAGGGATGATAGGAGCCCCATTGATGACGATGACACCCGCCATTCCCCTAGGGGCAGTGAGTCACCTTAA 957 0.5162 MAHKLPSEHSPLPLLPPLAIMPRYDDKYGGTRLYVGRLSSRTRSRDLDKVFGRYGRIRGVDMKHDYAFVEFSDPRDADDARYNLDGRDVDGSRIIVEFAKGGPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKSSGRGRSYSRSPVRSRSPRRDRSRDRSYSRDRSYSRSRSPVRRERSPVREDRSESPRYRSPEPKNSPLSAKARNDSPTYDEGNQQKDRGSMSPENGRLSARQDGSDYSDGPRRKSRSRSPASPKTNGSGRSDSPRDDRSPIDDDDTRHSPRGSESP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1467 318 Pfam Zinc knuckle 141 158 IPR001878 GO:0003676|GO:0008270
Mibi02g1467 318 Pfam Zinc knuckle 120 135 IPR001878 GO:0003676|GO:0008270
Mibi02g1467 318 MobiDBLite consensus disorder prediction 176 221 - -
Mibi02g1467 318 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 94 IPR000504 GO:0003723
Mibi02g1467 318 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 101 IPR000504 GO:0003723
Mibi02g1467 318 SMART c2hcfinal6 120 136 IPR001878 GO:0003676|GO:0008270
Mibi02g1467 318 SMART c2hcfinal6 142 158 IPR001878 GO:0003676|GO:0008270
Mibi02g1467 318 ProSiteProfiles Zinc finger CCHC-type profile. 142 158 IPR001878 GO:0003676|GO:0008270
Mibi02g1467 318 SUPERFAMILY RNA-binding domain, RBD 25 120 IPR035979 GO:0003676
Mibi02g1467 318 SUPERFAMILY Retrovirus zinc finger-like domains 111 159 IPR036875 GO:0003676|GO:0008270
Mibi02g1467 318 FunFam serine/arginine-rich splicing factor RS2Z32-like isoform X1 111 139 - -
Mibi02g1467 318 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 31 216 - -
Mibi02g1467 318 MobiDBLite consensus disorder prediction 292 318 - -
Mibi02g1467 318 MobiDBLite consensus disorder prediction 229 264 - -
Mibi02g1467 318 FunFam Serine/arginine-rich splicing factor RS2Z32 23 106 - -
Mibi02g1467 318 Gene3D - 21 109 IPR012677 -
Mibi02g1467 318 SMART rrm1_1 32 97 IPR000504 GO:0003723
Mibi02g1467 318 Gene3D - 111 139 - -
Mibi02g1467 318 Gene3D - 140 185 - -
Mibi02g1467 318 MobiDBLite consensus disorder prediction 154 318 - -
Mibi02g1467 318 ProSiteProfiles Zinc finger CCHC-type profile. 120 135 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1467 Mibi-ChrMibi02 14527187 14531147 Dispersed/Wgd