Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1462 ATGGAAGAAGCCACAGCCATATTTGCCGCACTCTCCACCCTCCCTCCTTCCCACCTCTCCGACCTCACCGCCGCCGTCTCCGCCGCCGTCCACCGCCACAACCTCCGACTCTCCGCCGTCCTCTCCTCCCAATCCCTCTTCTCCCTCTCCCTCCACCACCTCCACTCCCTCTCCCTCCCCCAAAAATCCCTCCTCATCGCCCGCCACGTCCTCTCCTCCCTCCACACCGTCACGCGCCGCCTCCACGCGCCGCCGCCCCCTCTCTCCACCGCCATCCCCCACCGCGACCTCGACGCCGTCCTCCTCCTCCTCCTATTCTGCGACGCCCACCAGCACCATCCACAGTCTCTAGAATCTCCGGTTCGCGATTGGCGAACAAATCTCAGCAATCTCGTCTCCGATAAATTGCTAAACATATCTTCTACTCCGATCGGAGAATGTAGCGCCTCGATTTTGATTCCGTACATTGAGACCGTCGTGCGGTGCCGGAGGCTGGTGGGCGTTATGGGCTTCGGCGGAGGGAAGGGCGGTGCTGACGTGGCCGCGTCGACGGCGGCCGTGGTGGCGATGCCGAGTGTGGAGGTGAGGGAAGGGGGTGGAGAGTGCGTGATTTGCAAGGAGGAGATGAGGGTGGGATGGGATGTGTGTGAGCTGCCATGTCAGCATCTGTTCCATTGGAATTGTGTGTTGCCGTGGCTGAGGAAAAGGAGTACGTGTCCTTGCTGCCGGTTCCGGTTGCCGTCCGATGATGTTGTTGGGGAGATCCAACGGCTGTGGGAGGTCTTGGTCAAGACGTGTGGGGCCGAGTGGGGTGACTGA 819 0.619 MEEATAIFAALSTLPPSHLSDLTAAVSAAVHRHNLRLSAVLSSQSLFSLSLHHLHSLSLPQKSLLIARHVLSSLHTVTRRLHAPPPPLSTAIPHRDLDAVLLLLLFCDAHQHHPQSLESPVRDWRTNLSNLVSDKLLNISSTPIGECSASILIPYIETVVRCRRLVGVMGFGGGKGGADVAASTAAVVAMPSVEVREGGGECVICKEEMRVGWDVCELPCQHLFHWNCVLPWLRKRSTCPCCRFRLPSDDVVGEIQRLWEVLVKTCGAEWGD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1462 272 SMART ring_2 202 242 IPR001841 -
Mibi02g1462 272 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Mibi02g1462 272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 141 247 - -
Mibi02g1462 272 CDD RING-H2_PA-TM-RING 201 243 - -
Mibi02g1462 272 SUPERFAMILY RING/U-box 198 248 - -
Mibi02g1462 272 Pfam Ring finger domain 201 243 IPR001841 -
Mibi02g1462 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 255 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1462 Mibi-ChrMibi02 14508579 14509397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1462 2 265 C3H Transcription Factor Family AT5G02750 49.281 4.91e-78 236