Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1447 ATGCCGCCTAAGCAGCAATCGAAAGCTGATATAGCAAAGAAGCAGAAGGTCGTAGAGGATAAAACCTTTGGTCTCAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAGAACCTCAAGCAGTCCGTCCAGCCCAAGCCTGATTCTTCCAAAACCGCTGCCAAGAAAAAGAAGGAGGAGGATAAGGCCAAGGAGAAGGAGCTAAATGAGTTGTTCAAAATCGCTATTACCCAGCCTAAAGTGCCAGTTGGTGTTGATCCCAAGTCCATAGTATGTGAGTTCTTTAAAGCAGGACAGTGTACCAAGGGCTTTAAATGCAAGTTTTCACATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATTTACAGCGATAAGCGCGACCAGGAAACGATGGAGGATTGGGATCAAGAGACATTGGAGAAGGTGGTGGAGTCAAAGAAAACCGAGTATCAACAGAATAAACCAACTGACATTGTATGCAAGCATTTTTTGGAGGCAGTGGAGAAGAAGCAATATGGTTGGTTTTGGGTCTGCCCAAATGGTGGTAAGAATTGCCACTATAGACATGCCCTTCCCCCTGGATATGTTTTAAAATCTCAAATGAAGGCCCTGTTGGAGGAAGAAGCTGAAAAGATGCCAATTGAGGAGGAGATTGAAGATCAGCGCTCCAAAGTGAAAACTACTACTCCTATGACTCCTGAGTTATTCATGCGATGGAAGCAGAAGAAGATTGCAGAAAGAGATGCCAATTTGGCTGAACAACAGGCAGAGAGAGCTAAGAATGATCGCATGAGCGGTCGCGAGCTATTTTTGTCAAATGCTAGCTTGTTTGTGGATGATGCTGAGGCATATGACAAGTATCAAAGAGAGGCCGAATCTAATGACCAAGAGCAGAAGCCACAGGCAAATGGTGTTGCTGAAGATGGCCCAAGCACCTCAACAGCGAATGATGCTGATGCTGAAGGAGAAGCTAATGGTGAAGCGATTGATGTAGATGACGATGATGAACTAGACATGGATGAATTGAATGAATTGGAAGCGAGTTTATCGAAGACATCAATCCATATAAAGGAGCCAGGAGCTGAAGCTTAA 1104 0.4384 MPPKQQSKADIAKKQKVVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPKPDSSKTAAKKKKEEDKAKEKELNELFKIAITQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDQETMEDWDQETLEKVVESKKTEYQQNKPTDIVCKHFLEAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEAEKMPIEEEIEDQRSKVKTTTPMTPELFMRWKQKKIAERDANLAEQQAERAKNDRMSGRELFLSNASLFVDDAEAYDKYQREAESNDQEQKPQANGVAEDGPSTSTANDADAEGEANGEAIDVDDDDELDMDELNELEASLSKTSIHIKEPGAEA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1447 367 Gene3D - 205 279 - -
Mibi02g1447 367 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Mibi02g1447 367 MobiDBLite consensus disorder prediction 40 64 - -
Mibi02g1447 367 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Mibi02g1447 367 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Mibi02g1447 367 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Mibi02g1447 367 Coils Coil 246 266 - -
Mibi02g1447 367 MobiDBLite consensus disorder prediction 292 343 - -
Mibi02g1447 367 MobiDBLite consensus disorder prediction 327 343 - -
Mibi02g1447 367 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Mibi02g1447 367 MobiDBLite consensus disorder prediction 301 323 - -
Mibi02g1447 367 Gene3D - 87 204 - -
Mibi02g1447 367 Pfam DRG Family Regulatory Proteins, Tma46 216 295 IPR032378 -
Mibi02g1447 367 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 365 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi02g1447 DFRP_C 3.7e-17 No_clan