Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1446 ATGGCCGCCGCCGCCGCAGCAGCTCGCCCACTCGTCACCGTCCAATCTCTCGATGCTGACATGGCCACTGATTCCTCTCCAACTGTTCATCTTCCTGATGTCATGAAAGCCGCCATTCGTCCCGACATTGTCACCTTCGTCCACTCCCACATCTCCAAGAACAGCCGCCAACCATACGCCGTTAGCAGGCGCGCCGGTCACCAGACCTCCGCCGAATCATGGGGAACAGGCCGCGCCGTCTCCCGTATCCCACGTGTCCCCGGCGGTGGGACCCACCGTGCAGGCCAGGGTGCTTTTGGTAATATGTGTCGTGGTGGTCGTATGTTCGCCCCTACGAAGATATGGCGCCGTTGGCACCGTAAGATCAACGTCAATCAGAAGCGATACGCCGTCGTTTCAGCGATTGCCGCATCGGCGATTCCTTCCATTGTTATGGCCCGTGGTCATAGGATTGAGTCTGTGCCTGAGATGCCTCTTGTGGTTAGTGATTCTGCTGAGAGTGTTGAGAAGACTAAGGATGCTATTAAGGTGATGAAGCAGATTGGTGCTTTTCCTGATGCTGAGAAGGCGAAGGATAGTCATTCTATTAGGCCTGGTAAGGGGAAAATGAGGAATCGTAGGTATATTTCTCGTAAGGGTCCTTTGATTGTGTATGGAACTGAAGGAGCTAAGGCTGTGAAAGCTTTTAGGAATATTCCTGGGGTTGAGGTTGCTAATGTGGAGAGGTTGAATTTGCTTAAATTAGCTCCTGGTGGTCATTTGGGGAGGTTTGTTGTTTGGACTAAGTCTGCTTTTGAGAAGCTTGACTCGATTTATGGGTCGTTTGATAAGATTTCTGAGAAGAAGAGAGGGTACTTTCTTCCTAGGGCCAAGATGGTGAATAGTGACTTGGCTAGGATTATCAACTCTGATGAGATTCAGTCCGTTGTGAGGCCCATTAAGAAGGAAATTAAGAGGGCACCTCTCAAGAAGAACCCGCTTAAGAACCTGAATGCTATGTTGAAACTGAACCCGTATCAGAAGACTGCGAAGAGGATGGCTCTTCTTGCCGAGGCCCAACGGGTTAAAGCAAAGAAAGAGAAGCTTGATAAGAAGAGGAGTTCTGTCTCTAAGGAGGAGGCTTCTGCTGTTAAGGCTGCAGGAAAAGCGTGGTATCAAACCATGGTGTCGGACTCTGATTATGCAGAATTCGAAAACTTTTCGAAGTGGTTGGGTGTGTCACAGTGA 1227 0.4996 MAAAAAAARPLVTVQSLDADMATDSSPTVHLPDVMKAAIRPDIVTFVHSHISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSIVMARGHRIESVPEMPLVVSDSAESVEKTKDAIKVMKQIGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKISEKKRGYFLPRAKMVNSDLARIINSDEIQSVVRPIKKEIKRAPLKKNPLKNLNAMLKLNPYQKTAKRMALLAEAQRVKAKKEKLDKKRSSVSKEEASAVKAAGKAWYQTMVSDSDYAEFENFSKWLGVSQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1446 408 ProSitePatterns Ribosomal protein L1e signature. 123 149 IPR013000 -
Mibi02g1446 408 Coils Coil 345 372 - -
Mibi02g1446 408 Pfam Ribosomal protein L4/L1 family 30 269 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mibi02g1446 408 Gene3D - 6 311 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mibi02g1446 408 Pfam 60S ribosomal protein L4 C-terminal domain 284 355 IPR025755 -
Mibi02g1446 408 SUPERFAMILY Ribosomal protein L4 24 270 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mibi02g1446 408 FunFam 60S ribosomal protein L4 6 311 - -
Mibi02g1446 408 MobiDBLite consensus disorder prediction 57 98 - -
Mibi02g1446 408 MobiDBLite consensus disorder prediction 57 76 - -
Mibi02g1446 408 PANTHER 60S RIBOSOMAL PROTEIN L4 7 401 IPR045240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1446 Mibi-ChrMibi02 14357749 14359673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1446 4 408 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.222 0.0 682