Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1445 ATGTTGGATCTTAATCTCAACGTCGTTTCCTCTGATTCCGCTTCGGATTCCGTTGACGTGCCTGCTGAGAATGTTGTGCTACTTTCTGGTAGCCAAATGGATAGCTCTGGGAGCTTTAATTCTTCCATCGTCAATGCCGATAACTCCACCAATACTTTTGACGAAGACTCTTGCTCTTATGGCGATGCTTTTGCTAATAACTTAGTAACACTAAAGAGGAATAACATACATGATGGCGAAACCTACAAAGCCGTTGATCTTCCAGTTGGTGAAGTTGAAGATACCTGTACTGATCGGACCATCCAGCTTTTTCCGATCGCCGGTGCCGAAGAGGGTCGTGTGACTGAATTGCAAATCGGCCAGAGATTTCCAGGTTCTTCTTCAAGTAAAAGATGGTTGGATTTCCTGTGCAAGGAGGTGGGTCCCGGTGGTAAGCCGGAAGAGAGGATGCTTCCGCCGCCGCCGCAGAAACCGCAGGTCAAGAAGAGTCGTCGGGGACCGAGGTCGCGGAGCTCACAGTATCGCGGTGTCACATTTTATCGAAGAACTGGAAGATGGGAATCGCATATATGGGATTGTGGGAAACAAGTGTACTTAGGCGGATTTGATACAGCACATGCTGCGGCAAGGGCATATGATCGAGCTGCAATCAAGTTTCGTGGCCTTGAGGCTGATATTAATTTCAATGTTAGTGATTATGAGGAGGATATAAAGCAGATGAGTAATTTCACAAAGGAAGAGTTTGTGCATATTCTGCGGCGACAGAGCACTGGCTTCTCAAGGGGGAGCTCTAAATATAGAGGAGTTACTCTGCATAAATGTGGACGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGTATATATATCTCGGGCTATTTGATAGCGAAATAGAGGCTGCAAGGGCGTATGATAAAGCGGCAATAAAGTGCAATGGGCGGGAAGCAATGACGAACTTTGAGCCAAGCTCATACGAAGGGGAGATAATCTCCGCACATAATGAAGATGGCAACCCAAATCTTGATCTTAGCTTGGCCATTGCTCCCCCTGCTTATTCTGATGGTTTTCAAGTCCAGCATGGCTGGACCAATCTTCCTGTTGATGGGAGAGTTGGGTTCGAGAACCCTGCATCAAGGTTACTGAAGGGTCAACCGTCTCATGTTTTCCCAATTGCTTCCCAGCATCCTTCTGTCTGGAATAGTGCTGATTTCTTTCCTATCAATCAGGAAAGAGCAATGGAGAAAAGGATGGAAGCTAATTCCCTGTCAAACTGGGTATTTCAATACCAAGGTCCCTATGGCGAGGCGTCTTTGATTCCATCCCTCTCTGCTGCAGCATCATCAGGATTCCCCTCAACAATGTTACCACCACCGGCAGCTAATAGTCAGATTCATTTTCCAAACATGACGATCCATCCCTAG 1425 0.4695 MLDLNLNVVSSDSASDSVDVPAENVVLLSGSQMDSSGSFNSSIVNADNSTNTFDEDSCSYGDAFANNLVTLKRNNIHDGETYKAVDLPVGEVEDTCTDRTIQLFPIAGAEEGRVTELQIGQRFPGSSSSKRWLDFLCKEVGPGGKPEERMLPPPPQKPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNVSDYEEDIKQMSNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAMTNFEPSSYEGEIISAHNEDGNPNLDLSLAIAPPAYSDGFQVQHGWTNLPVDGRVGFENPASRLLKGQPSHVFPIASQHPSVWNSADFFPINQERAMEKRMEANSLSNWVFQYQGPYGEASLIPSLSAAASSGFPSTMLPPPAANSQIHFPNMTIHP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1445 474 Pfam AP2 domain 173 221 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 Pfam AP2 domain 264 314 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 CDD AP2 173 231 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 Gene3D AP2/ERF domain 172 231 IPR036955 GO:0003700|GO:0006355
Mibi02g1445 474 Gene3D AP2/ERF domain 264 323 IPR036955 GO:0003700|GO:0006355
Mibi02g1445 474 ProSiteProfiles AP2/ERF domain profile. 173 229 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 SUPERFAMILY DNA-binding domain 172 231 IPR016177 GO:0003677
Mibi02g1445 474 PRINTS Ethylene responsive element binding protein signature 304 324 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 PRINTS Ethylene responsive element binding protein signature 266 277 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 FunFam AP2-like ethylene-responsive transcription factor 172 231 - -
Mibi02g1445 474 SUPERFAMILY DNA-binding domain 264 323 IPR016177 GO:0003677
Mibi02g1445 474 MobiDBLite consensus disorder prediction 143 174 - -
Mibi02g1445 474 CDD AP2 264 324 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 FunFam AP2-like ethylene-responsive transcription factor 264 324 - -
Mibi02g1445 474 ProSiteProfiles AP2/ERF domain profile. 265 322 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 SMART rav1_2 265 328 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 SMART rav1_2 173 235 IPR001471 GO:0003700|GO:0006355
Mibi02g1445 474 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 138 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1445 Mibi-ChrMibi02 14348826 14351454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1445 155 347 AP2-EREBP Transcription Factor Family AT4G36920 80.402 8.78e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi02g1445 AP2 1.1e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1445 02 14348826 14351454 Mibi02g1445 02 14348826 14351454 ECH