Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1437 ATGAGCAGAGGAACCACGTGGCCGAATCATCTGCCCAGGCTTGATCTTCCTTCACGCAGCACAGAAGAAGGAGAGAGGGACGTCCGATCCTTCCCCCATTCTCTCACCGATCTCTCTCCCGCCAATTACAAATCCCCCCAACAACAACCCACCAGGATTCCTGCAACCATGGCTGATGGTCCGGCCAGTCCTGGCGCTGGTGGTAGCCACGAGAGCGGTGATCAGAGCCCCCGTTCTAATGTTCGTGAGCAGGATAGGTACTTGCCCATCGCCAATATTAGCCGAATCATGAAGAAGGGGCTTCCTCCTAATGGCAAAATCGCCAAGGATGCTAAGGAGACTGTGCAGGAATGCGTTTCTGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGGGAAAAGAGGAAAACGATTAACGGCGATGATTTGCTTTGGGCAATGGCAACTTTAGGGTTCGAGGATTACATCGATCCCCTTAAGATTTATCTGAGCAGATACAGGGAGGGTGATACCAAGGGCTCGGCCAAGGCCGGAGAAGTATCTGCTAAAAAAGATGTTCAACCGAGTCCCAATGCTCAGCTCGCTCATCAAGGTTCTTTCCCACAAGGTGTGAACTACCCAAATTCTCAGGTAACTTCCCTATCTCTATCCCCCTTGGTATTTCTCTTTGAGATTTTCTGGAAGCGTTGTTTTGTTATATTGAATAATATGCTGAGTTTACTGTTTGGACTTATATATTAA 753 0.4874 MSRGTTWPNHLPRLDLPSRSTEEGERDVRSFPHSLTDLSPANYKSPQQQPTRIPATMADGPASPGAGGSHESGDQSPRSNVREQDRYLPIANISRIMKKGLPPNGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREGDTKGSAKAGEVSAKKDVQPSPNAQLAHQGSFPQGVNYPNSQVTSLSLSPLVFLFEIFWKRCFVILNNMLSLLFGLIY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1437 250 FunFam Nuclear transcription factor Y subunit B-3 76 200 - -
Mibi02g1437 250 Gene3D Histone, subunit A 74 205 IPR009072 GO:0046982
Mibi02g1437 250 PRINTS CCAAT-binding transcription factor subunit A signature 153 171 - -
Mibi02g1437 250 PRINTS CCAAT-binding transcription factor subunit A signature 134 152 - -
Mibi02g1437 250 PRINTS CCAAT-binding transcription factor subunit A signature 115 133 - -
Mibi02g1437 250 SUPERFAMILY Histone-fold 84 186 IPR009072 GO:0046982
Mibi02g1437 250 MobiDBLite consensus disorder prediction 178 201 - -
Mibi02g1437 250 MobiDBLite consensus disorder prediction 35 54 - -
Mibi02g1437 250 MobiDBLite consensus disorder prediction 1 89 - -
Mibi02g1437 250 MobiDBLite consensus disorder prediction 16 32 - -
Mibi02g1437 250 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 71 191 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi02g1437 250 ProSitePatterns NF-YB/HAP3 subunit signature. 118 134 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mibi02g1437 250 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 87 151 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1437 Mibi-ChrMibi02 14287998 14289671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1437 57 223 CCAAT-HAP3 Transcription Factor Family AT2G37060 73.143 2.72e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi02g1437 CBFD_NFYB_HMF 5.9e-27 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1437 02 14287998 14289671 Mibi02g1437 02 14287998 14289671 ECH