Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1421 ATGGGACATAGACATTTATATAGCATATCTCAGATGTTTGGGAGTGAGCATGAGCAGAACTGGAATTATATGCATCCTGATCAACACAATGTGCTACCAGGTAGGGCTAGCACCTCAGAGAATGGTTCTTTTATTTATCCACCAGAAAATATGTCTATAGATGGCAGCTCTTTGGCTGCTCCTTGGAACAATGCCACAATTTCAAATGGATATGCATCCTCAAGTATCAACATTGAATTACCCCCGCGTCAATCAGAATCGTCAAGATCTTCTCGTGATCATTTTCTGCGTTCATCAAATCCTGGAGCCTTTTTCACAGTTTCTGAAAACTGTACTCATCAGCCTTCTTTTAATTATGATAGACAAGCATTTCATGTTGCTGATGGTGATTTCTTTGATTTTACAATGGGAAGCGGAAGAGGGCCTTACAAGCGAAAGAGCCCTGGAATTCCTTCAGTTTGTGAGAGAGACAGCACGAGTAGCTGTTTCAGTGGAGGGAGCTCAACTGATCTCCCTACATCTTCAGAAATAAGTCAGGTGAAGCCAAGCTTGGATTCTCAATATCTACCTTGGGATCATGCTACTATGACACCCCCCTTCAGAGGCAGTGGCCTTTCAATCAGGGGTGAGGGATCTTTAAGGAATGTGAGAAGTCGTTCTGCACTTGATTTGGAGCCCAATCTTGCTAGAACGCATTTATCTGCTAACCATTTGCACCACTTATCTTCTGGCATGTCCACCGACCATTCTAACGCAGTGTGTCGTTCTGGTCATAGTTCTAGTACTATGACAAGGGACTGGAGCCAAATGAGTATGCCTCCGGCTCAGGGGAGGGTATCATTGTCTGAATCAAGCAGATATAATCACGAGCCAAGTTGCTTTCTGGTTGGAAGTGGTGTTCGTAATGTTTCGGTGGATGCTGGGAGTTACCATCATGAATATAATGCGAGCATAAATCGTACCGTTCCTCAAAATTTTCACAGTAATCCCACTCACTCTGCTAGGGGAGTTCGAAGTAACTATTCCCAAAGATCTACTCCAACACCAACTCCAACTTTTAGAGCCTCATCAAGCTCATGCGTGGGACATATGGTGCCTTCAGATGGTGGTGGGTTGCATATGGGAGCTGAAGGTTTTATGTGTAGACATCCAAGACCCTTGACTTCCATCAGTTGGCGGAGTAGTGATAGGAATGGGAGGTCAAGGATATCTAACGAGAGGTATCGATCATTGGCTGACGAGGCTACTCTTCATGATCGATTTTCCTCTGAGGGTTTCATGGTTGTTGATCGTGTGCCTCTGTATGGTTCTCGTAGTATGATTGATCAGCATAGAGACATGAGGATGGACATAGACAATATGAGTTATGAGGAACTACTTGCTCTGGGAGAGAGGATTGGTCATGTCAGCACGGGATTGTCTGAGAACTTGATTTCCAAGTGTTTGACAGAATCAATTTATTGTTCATCAGAGCAGAGTCAAGAGGAGGGAAGTTGTGTAATCTGCCTGGAAGAGTACAAGTATATGGACGATGTTGGGGCACTGAGAAGTTGCGGCCATGACTATCATGTGAGCTGCGTTAGAAAGTGGTTGTCTTTGAAGAACATATGTCCTATCTGCAAAACATCTGCGCTTCCTGATGATACGAAGGATAAATAA 1659 0.4406 MGHRHLYSISQMFGSEHEQNWNYMHPDQHNVLPGRASTSENGSFIYPPENMSIDGSSLAAPWNNATISNGYASSSINIELPPRQSESSRSSRDHFLRSSNPGAFFTVSENCTHQPSFNYDRQAFHVADGDFFDFTMGSGRGPYKRKSPGIPSVCERDSTSSCFSGGSSTDLPTSSEISQVKPSLDSQYLPWDHATMTPPFRGSGLSIRGEGSLRNVRSRSALDLEPNLARTHLSANHLHHLSSGMSTDHSNAVCRSGHSSSTMTRDWSQMSMPPAQGRVSLSESSRYNHEPSCFLVGSGVRNVSVDAGSYHHEYNASINRTVPQNFHSNPTHSARGVRSNYSQRSTPTPTPTFRASSSSCVGHMVPSDGGGLHMGAEGFMCRHPRPLTSISWRSSDRNGRSRISNERYRSLADEATLHDRFSSEGFMVVDRVPLYGSRSMIDQHRDMRMDIDNMSYEELLALGERIGHVSTGLSENLISKCLTESIYCSSEQSQEEGSCVICLEEYKYMDDVGALRSCGHDYHVSCVRKWLSLKNICPICKTSALPDDTKDK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1421 552 ProSiteProfiles Zinc finger RING-type profile. 499 541 IPR001841 -
Mibi02g1421 552 SUPERFAMILY RING/U-box 489 546 - -
Mibi02g1421 552 MobiDBLite consensus disorder prediction 322 359 - -
Mibi02g1421 552 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 464 545 IPR013083 -
Mibi02g1421 552 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 140 545 IPR045191 GO:0061630
Mibi02g1421 552 MobiDBLite consensus disorder prediction 243 277 - -
Mibi02g1421 552 Pfam Ring finger domain 498 541 IPR001841 -
Mibi02g1421 552 SMART ring_2 499 540 IPR001841 -
Mibi02g1421 552 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 464 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1421 Mibi-ChrMibi02 14148459 14151139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1421 1 551 C3H Transcription Factor Family AT2G37150 40.998 2.00e-102 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1421 02 14148459 14151139 Mibi02g1421 02 14148459 14151139 ECH