Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1417 ATGAGCGTCATCGATATCCTAACTAGAGTTGATTCGATCTGCAAGAAGTTCGACAAGTACGACGTCGACAAGCACAAGGATTCCAATATCTCTGGCGATGATGCTTTTGCTCGACTCTACGCTCTAGTCGAAGCTGACATCGAGGCAGCTCTTGAGAAAGCAGAAACTGCCTCCAAGGAGAAAAGCAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACTAAGGCTCGATTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTTTAAAGAAGGTAAAAGGGCTTTCATCAGAAGAATTTGCTGCTCGCAATGATTTGGTTCTTGCACTGCCAGAGAGGATCCAAGCCATCCCAGATGGGACACCTGCAGCACCCAAAAAAACAGTAGGTTGGGCTGCTTCTGCTTCGCGTACTGAAATTAGGTTTGATTCAGATGGTCAATTTGATGATGAACACTTCCGACAAACCGAGGAATCAAGTAAATTTCGGCAAGAGTATGAAATGCGTAAAATGAAGCAGGATCAAGGTCTGGATGTGATTGCAGAAGGCTTGGATACATTGAAAAATATGGCACACGATATGAATGAGGAGCTAGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAAGCATCATCTGACCTCAAGAATACCAACGTCAGGCTCAAAGACACAGTGAACCAGCTACGATCCAGTCGAAATTTCTGTATTGACATTGTGCTGTTGATTATCATTTTGGGAATTGCTGCCTATTTATACAAGTAA 786 0.4453 MSVIDILTRVDSICKKFDKYDVDKHKDSNISGDDAFARLYALVEADIEAALEKAETASKEKSRASVVAINAEIRRTKARLLEEVPKLQRLALKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAAPKKTVGWAASASRTEIRFDSDGQFDDEHFRQTEESSKFRQEYEMRKMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1417 261 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mibi02g1417 261 Gene3D - 170 231 - -
Mibi02g1417 261 CDD SNARE_Qc 175 230 - -
Mibi02g1417 261 SMART tSNARE_6 165 232 IPR000727 -
Mibi02g1417 261 FunFam Putative syntaxin-71-like 170 231 - -
Mibi02g1417 261 SUPERFAMILY SNARE fusion complex 165 230 - -
Mibi02g1417 261 Coils Coil 40 60 - -
Mibi02g1417 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Mibi02g1417 261 PANTHER SYNTAXIN 46 252 IPR045242 -
Mibi02g1417 261 Pfam SNARE domain 207 256 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1417 Mibi-ChrMibi02 14120593 14122461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1417 1 260 SNARE and Associated Proteins AT3G09740 77.481 6.07e-153 425