Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1416 ATGGAGAAAGAACCCAACTTGGAAATTCAACTACTCCCTCCTGGATTTAGATTCCACCCTTCAGACGAGGAGCTCATTGTACACTACCTCAGAAACAAAGTCACTTCATGTCCCCTCCCTGCCTACTTCATTGCAGACATAGATCTCTATAAGTTCAACCCATGGGAGCTTCCAAGCAAGGCTTTGTTTGGAGAGGATGAGTGGTTTTTCTTTACTCCGAGGGACAGAAAGTATCCAAATGGATTGAGGCCTAATAGAGCAGCTGGATTAGGCTATTGGAAGGCTACGGGGACTGATAAACCTATTCTTTCATCTTGTGGAATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGTCGCCCTCCTAAAGGATCTAAAACCGATTGGATCATGCATGAGTATAGGTTGCTTGATTCAATGATCTTGAGTTGCAAACAAAGAGGGTCTATGAGACTGGATGATTGGGTGCTGTGCAGAGTTCGTCAAAAAATCAGCAGCCCTAGAAGCATTTGGGAGGAGTCGAATGAACCTACAAGCTACTTTCAACAGATGAATTATGAGAGTCATGATCCAGAAGAAACTGTCAAAAACCGTGTGTTCAGTGAATTTCCCATGTTGCCGTACATTTTAGGATCTACGACGAATGTTACCCTTCCTTCCATGGGAAATCCATCATCAAGCTTAAGCTGTCAGCATAAAGATAATGCTTTTGTCAATGAAGACACCTCAAACATAGAAGCACAGCTCTCAGAATTCACTGCTGATCAGAGCTTGATGAAGAGAAAACTCTATGAACAAAGCCAAATTGACCTTTATGATTCTCCTCCCTTTAAGAAACAAAGAGAGGAAGACGATGAGAGGAACATGCTAGACATAGACATGAGCAAAAGCTACACCAGTAATTTCAGCAGCTTCTTTGATCATTGGAATGCCACCACACAGCCTCAAGAGCTTAATAATCTGGTCTTTGCAGGATATGTTTGA 993 0.426 MEKEPNLEIQLLPPGFRFHPSDEELIVHYLRNKVTSCPLPAYFIADIDLYKFNPWELPSKALFGEDEWFFFTPRDRKYPNGLRPNRAAGLGYWKATGTDKPILSSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMILSCKQRGSMRLDDWVLCRVRQKISSPRSIWEESNEPTSYFQQMNYESHDPEETVKNRVFSEFPMLPYILGSTTNVTLPSMGNPSSSLSCQHKDNAFVNEDTSNIEAQLSEFTADQSLMKRKLYEQSQIDLYDSPPFKKQREEDDERNMLDIDMSKSYTSNFSSFFDHWNATTQPQELNNLVFAGYV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1416 330 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Mibi02g1416 330 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Mibi02g1416 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 259 - -
Mibi02g1416 330 FunFam NAC domain-containing protein 72-like 21 171 - -
Mibi02g1416 330 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Mibi02g1416 330 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1416 Mibi-ChrMibi02 14116112 14117671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1416 12 175 NAC Transcription Factor Family AT1G61110 66.860 8.70e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g1416 NAM 4e-37 No_clan