Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1415 ATGCTTTCTGGTGACCCCTTTTCCTTATCCTCTTCCCTCCCACCTTTCCCTCCAGAATCCACAAACCAAAACCCTAACCCTAAACTCAATAACCCCCCTCCTCTCCCCAAGAAGAAGAGAAACCTCCCAGGAACACCAGATCCAGATGCGGAGGTTATTGCTCTTTCTCCGAAGTCCCTCATGGCGACCAACAGGTTCATTTGTGAGATATGCAATAAGGGGTTTCAGAGGGACCAGAATCTGCAGCTTCACCGGAGGGGGCACAATCTGCCATGGAAGCTGAGGCAGAGGTCGAACAAGGAGGTGAGGAAGAAGGTGTACATATGTCCGGAGATGACATGTGTGCACCATGACCCTTCCAGAGCACTGGGGGACCTCACCGGAATAAAGAAGCATTATAGCAGAAAACACGGGGAGAAGAAATGGAAGTGCGACAAGTGTTCTAAGAAATATGCAGTCCAGTCCGATTGGAAAGCCCACACCAAAACTTGTGGTACTAGAGAATATAAGTGCGACTGTGGTACCCTCTTCTCTAGGAAGGATAGTTTCATCACCCACAGAGCTTTCTGTGATGCCTTGACGGAAGAGAGTGCGAGGCTTACTTCAGTTGGTGCGTCGGATTTGAATTTTAAGAATGAAGAGAATGTTGTGATGAACTCTGCCTCTCAGTTTGGCTCGGCTCATGGATTTGGGATTTCTCAATTTGGTGGAAATGAGTTTCGTTCAGAATTTGATGGGATGGGCATAGCTATGGCTGGTGGTGCTGGTGGCAGTGAGCAGCAAATTATGAGGCCTAACTTGTCACTTTGGTTGAACCAGCTGGGAAATAATCCTCATCGCATGGATAATCATCTAGAAGTTGGGCCAAATTCTGGTGCTATTTATATGTCATCTTCAAGTTCATCAGGCTTGCCCGAGATTAATATGCAAATGCCTCAGCCTAATAATACTTTTGCTCCTTCGTCTCTGTCCAATAATTACTCACCATCCTCACTTCCAATTGGGAAGAAAGGAGAAAGTACTGGTGGTGCGAACTTGGTGTCTATTTATAATTCAGACTCTCGAAATAATCCATCCAAGCCAGCTTCTCCCATGTCAGCCACTGCACTTCTACAGAAAGCGGCTCAGATGGGTTCAACCAGAAGCAGCAACCCTTCCATATTTAGCGGCAGTTTTGGGGTGATGACCTCGTCTTCTTCCCACACAACGACAGGTCTCGAAAATAACAATGCAGATAATCCTCAAAACCGTAATAACGAGCTGAGCCATCAAGTGTATCATCATCATCATCAGAGTATGAAGCAATCCGAGACGTTTAGTCCAAGCAGCAGTGGTGTGGGTACGTTGGGGATAAGTAATGATAATAACTTCAGCTCATTGACGCATTCATCTACCAGTGGTCTTAATGAGCTTGTTTCTCAATCCCATGGAAGACAAACTAGTAACAAACAATTGCAACTGAAGCTTCATCCTGATTCATCAAACAATGGTGGGGAACATGGTTACACTAGAGATTTTCTTGGAATGAACGCACCAGGAGGAGCTGGGTCTCCTTTCCTTCCCCAAGAGCTCGCTAAGTTTGCTTCCATGGCATCATCCATGGGAATGTCTCAGTTCCCGAGTAGTGCTACTCAGTAG 1638 0.4621 MLSGDPFSLSSSLPPFPPESTNQNPNPKLNNPPPLPKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEMTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEESARLTSVGASDLNFKNEENVVMNSASQFGSAHGFGISQFGGNEFRSEFDGMGIAMAGGAGGSEQQIMRPNLSLWLNQLGNNPHRMDNHLEVGPNSGAIYMSSSSSSGLPEINMQMPQPNNTFAPSSLSNNYSPSSLPIGKKGESTGGANLVSIYNSDSRNNPSKPASPMSATALLQKAAQMGSTRSSNPSIFSGSFGVMTSSSSHTTTGLENNNADNPQNRNNELSHQVYHHHHQSMKQSETFSPSSSGVGTLGISNDNNFSSLTHSSTSGLNELVSQSHGRQTSNKQLQLKLHPDSSNNGGEHGYTRDFLGMNAPGGAGSPFLPQELAKFASMASSMGMSQFPSSATQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1415 545 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Mibi02g1415 545 Gene3D Classic Zinc Finger 120 199 - -
Mibi02g1415 545 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
Mibi02g1415 545 SMART c2h2final6 66 88 IPR013087 -
Mibi02g1415 545 SMART c2h2final6 107 137 IPR013087 -
Mibi02g1415 545 SMART c2h2final6 142 162 IPR013087 -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 299 335 - -
Mibi02g1415 545 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 525 IPR031140 -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 1 51 - -
Mibi02g1415 545 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Mibi02g1415 545 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 435 500 - -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 1 17 - -
Mibi02g1415 545 FunFam protein indeterminate-domain 12-like 45 113 - -
Mibi02g1415 545 Gene3D Classic Zinc Finger 45 115 - -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 299 509 - -
Mibi02g1415 545 Pfam Zinc-finger double-stranded RNA-binding 66 88 IPR022755 -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 18 41 - -
Mibi02g1415 545 MobiDBLite consensus disorder prediction 344 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1415 Mibi-ChrMibi02 14099166 14101076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1415 1 236 IDZ Gene Family AT5G03150 67.293 1.58e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1415 zf-C2H2_jaz 8.1e-05 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1415 02 14099166 14101076 Mibi06g2543 06 45620463 45621830 CCT
Mibi02g1415 02 14099166 14101076 Mibi02g1415 02 14099166 14101076 ECH