Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1411 ATGGGTAACATAGGAAGTAGCGCCGCTCTCGCCCGTCGGAGAAGCCATAGCAGACGGAATCATCCGCCGCCGCCGAATCGATCTGTAAATCCTCAGACATCGCAAATCCCAAACCAGAATCCTCCGCCGCATTTTCAGTTGCCAGGTCACTATTCAGCTCCCCATCAGGCTATGCCGGCGCCGCCTTTGCCGGCTCCTCTCGATCACCACCATCGTGCGAGGCCTCACCCTCAAACAGACCCTTCATTGAATGGTGCTAATTACCATTGTGGGCCTCCTGTGTCTCCACCTGCGCCTTATGTGGAGCATCAGAAGGCGCTCACCATAAGGAATGATGTTAATGTCAAGAAGGAGACTCTCAGGATTGAACCTGATGAGCAAAATCCTGGCCGGTTCCTTGTTGCATTCACTTTCGATGCCACTGTTGATGGGAGCATCACCATTCTTTTCTTTGGCAAAGAAGATGATAGCTGCATCCTCACACCAATGAAGCAAAATATTCTTGCCCCTGTAACTGTAAGTTTCCAGCAAGGTCTTGGCCAACAGTTTAAGCAGCCAATTGGAACTGGTATTGACTTTTCAGTCTTTGAGGAGTCAGAATTATCAGAAGGGGGTTTAATAGATGTGTTCCCTCTAGCAGTGAAGGCTGATGCATCCTGTGGCGAACAAGATGGATCGAATGAAAATTTTACATCAGGTAACAGAAACTCTCAGATAACTCTAGCAGCATTTGAGAAGGAGAAAGGAGGATTCCGGGTAAAGGTAGTTAAGCAGATCTTATGGGTAAACAAAATGAGGTATGAACTGCAGGAGATATATGGTATTGTAAATTCAGTGGAAAGTGACGTGGACGACAATGATTCTGGAAAGGAGTGTGTTATCTGCCTCTCAGAGCCACGAGACACAACTGTTCTTCCTTGCCGACACATGTGCATGTGTAGTGGATGTGCTAAGGTTCTGAGATTTCAGACGAATAGATGCCCAATTTGCAGACAGCCAGTTGAGAGGCTTTTGGAGATAAAGGTCAATAATGACAACACACCTGAGGAATGA 1053 0.471 MGNIGSSAALARRRSHSRRNHPPPPNRSVNPQTSQIPNQNPPPHFQLPGHYSAPHQAMPAPPLPAPLDHHHRARPHPQTDPSLNGANYHCGPPVSPPAPYVEHQKALTIRNDVNVKKETLRIEPDEQNPGRFLVAFTFDATVDGSITILFFGKEDDSCILTPMKQNILAPVTVSFQQGLGQQFKQPIGTGIDFSVFEESELSEGGLIDVFPLAVKADASCGEQDGSNENFTSGNRNSQITLAAFEKEKGGFRVKVVKQILWVNKMRYELQEIYGIVNSVESDVDDNDSGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNNDNTPEE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1411 350 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 291 331 IPR045195 -
Mibi02g1411 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 341 IPR013083 -
Mibi02g1411 350 MobiDBLite consensus disorder prediction 24 48 - -
Mibi02g1411 350 MobiDBLite consensus disorder prediction 1 98 - -
Mibi02g1411 350 Pfam Zinc finger, C3HC4 type (RING finger) 290 336 - -
Mibi02g1411 350 PANTHER MAHOGUNIN 1 344 IPR045194 GO:0061630
Mibi02g1411 350 FunFam probable E3 ubiquitin-protein ligase LOG2 276 341 - -
Mibi02g1411 350 SUPERFAMILY RING/U-box 291 337 - -
Mibi02g1411 350 SMART ring_2 292 330 IPR001841 -
Mibi02g1411 350 ProSiteProfiles Zinc finger RING-type profile. 292 331 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1411 Mibi-ChrMibi02 14074465 14076837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1411 89 311 C3H Transcription Factor Family AT3G09770 61.304 8.13e-93 279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1411 02 14074465 14076837 Mibi02g1411 02 14074465 14076837 ECH