Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1409 ATGAAAATTTCTCGTTCCTTTCTCTCTTGTTTCTCACCAACTATCAACGAACCAAGATACCTGGATGATGATGATGACGACATATCAGAAGGAGGCAGTGGTGAAGCATTTCGTGTATTCTCTGGCTGCGAATTGAAATCAGCCACTCGTGGCTTCAATTCCTGGGACAGGGTTGGACAAGGCGGATTCGGTTCTGTTTACAAGGGCAAGCTTCGGAACGGTAATATTGTGGCTGTGAAGGTGCTTTCAATCGAACTGGAATCCATGAGAGGAGAAATGGAGTTCGTCGCAGAGTTGGCTACAATATCTCGTGTCAAGCACGAAAATTTGGTTAGTCTTAGAGGGTGTTGCGTGGAAGAATCCCGAAGATATCTAGTCTTCGATTACATGGAAAACAATAGTTTGTCCCGCACATTTTTAGGTACAGAGGATAAGAGGATGAAGTTCAGATGGGAATTGAGGAGGAAAATATCAATAGGGGTGGCTCGTGGCCTTGCCTATCTCCACGACCAACTAAAACCTCACATTGTCCACAGAGATATCAAACCCAGCAACATCCTTCTCGATCATAACTTCACTCCAAAACTATCTGACTTTGGTTTCGCCAAGTTATTTAGGGACGACAAATCCTATATCAGCACTAGAGTCGCTGGTACATTGGGCTACCTTGCTCCCGAGTATGCCACGACAGGAAAGTTGACGCGAAAGTCAGATGTTTATAGTTTTGGGGTATTACTCTTACAAATTGTTAGCGGCCAGGGAGCGGTTGATGCTTATCAGGATATGGATCGTTTCCTTGTAGAGAAGGTGTGGGGAGCTTATAAAGCCAAGGAGCTAGTGAAAATGGTGGATCCTGTGATTACAAATCTGGACATGGTAGCAGAAGAAGCCATTCGATTCCTAAAAGTAGGGCTGCTTTGCGTGCAAGGAACAGCCAAACTTAGGCCGAGAATGACAGAGGCCGTTGAGATGTTGACTAGTAGCAGCAATAATGTTAATGACACGTTGGAAGGTGTTTCTATCTCTAAACCAGGATTTGTTGCTGATCTCAGAAACATTAAGATAAGGCAGCAAATACCTGTGATGAGTCCTGAATCAATTTCAAGTGGTGCAAATCAGGGTCTTTGGAGTTCCACCATTCTGGCCCGTTAA 1152 0.4444 MKISRSFLSCFSPTINEPRYLDDDDDDISEGGSGEAFRVFSGCELKSATRGFNSWDRVGQGGFGSVYKGKLRNGNIVAVKVLSIELESMRGEMEFVAELATISRVKHENLVSLRGCCVEESRRYLVFDYMENNSLSRTFLGTEDKRMKFRWELRRKISIGVARGLAYLHDQLKPHIVHRDIKPSNILLDHNFTPKLSDFGFAKLFRDDKSYISTRVAGTLGYLAPEYATTGKLTRKSDVYSFGVLLLQIVSGQGAVDAYQDMDRFLVEKVWGAYKAKELVKMVDPVITNLDMVAEEAIRFLKVGLLCVQGTAKLRPRMTEAVEMLTSSSNNVNDTLEGVSISKPGFVADLRNIKIRQQIPVMSPESISSGANQGLWSSTILAR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1409 383 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 130 329 - -
Mibi02g1409 383 CDD STKc_IRAK 58 326 - -
Mibi02g1409 383 SUPERFAMILY Protein kinase-like (PK-like) 36 325 IPR011009 -
Mibi02g1409 383 SMART serkin_6 52 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1409 383 Pfam Protein kinase domain 56 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1409 383 Gene3D Transferase(Phosphotransferase) domain 1 130 339 - -
Mibi02g1409 383 ProSiteProfiles Protein kinase domain profile. 52 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1409 383 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Mibi02g1409 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Mibi02g1409 383 Gene3D Phosphorylase Kinase; domain 1 23 129 - -
Mibi02g1409 383 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 38 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1409 Mibi-ChrMibi02 14068221 14069951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1409 39 349 Receptor kinase-like Gene Family AT1G56120 46.795 1.99e-86 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi02g1409 Pkinase 7.1e-50 CL0016