Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1406 ATGACTAAGGACCTTGAAGGACCCCCTCCTCCTCACCCTCACCCTCACCCTCACCCTCACAAGGACTACCATGACCCCCCTCCCGCCCCTCTCTTGGACGCCGCCGAGCTCGGCAAGTGGTCCTTCTACAGGGCCGTCATTGCCGAGTTCGTCGCCACCCTCCTCTTCCTCTACGTCACCGTCCTCACCGTCATCGGTTACAATTCCCAGATCGACCACGCCCTCAACGGCACCGACTGCGACGGCGTCGGCATCCTCGGCATTGCCTGGGCCTTCGGCGGCATGATCTTCGTCCTCGTCTACTGCACCGCCGGCATTTCTGGTGGGCACATAAACCCGGCCGTGACGTTCGGGCTGTTGCTGGCGAGGAAGGTGTCGCTGATCAGAGCGATTGCGTACATAGTGGCTCAGTGCCTGGGAGCCATATGTGGTTGTGGCTTGGTCAAGGCTTTCCAGAAGGCCTACTACAACAGGTATCAGGGTGGAGCCAACATGTTGTCTTCTGGCTACAGTAGCGGCACTGGCTTGGGTGCTGAGATTATAGGCACCTTCGTCCTTGTCTACACCGTCTTCTCCGCCACCGATCCCAAGAGAAATGCCAGAGATTCTCACGTTCCCGTGTTGGCTCCTCTTCCAATTGGATTCGCTGTGTTCATGGTTCACCTGGCCACCATCCCCATCACCGGCACCGGCATCAACCCGGCCAGGAGCTTTGGGGCCGCAGTCATGTACAACAACCAGAAGGCATGGGATCACCATTGGATCTTTTGGGTCGGACCATTCATTGGTGCCGCCATAGCCGCAATTTACCACCAATATGTGTTGAGAGCTCAGGCGGCCAAAGCTCTGGGCTCTTTCAGGAGCAGCTCCAGTTTGTAA 879 0.5791 MTKDLEGPPPPHPHPHPHPHKDYHDPPPAPLLDAAELGKWSFYRAVIAEFVATLLFLYVTVLTVIGYNSQIDHALNGTDCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLIRAIAYIVAQCLGAICGCGLVKAFQKAYYNRYQGGANMLSSGYSSGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYNNQKAWDHHWIFWVGPFIGAAIAAIYHQYVLRAQAAKALGSFRSSSSL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1406 292 CDD MIP 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 FunFam Probable aquaporin PIP1-2 29 290 - -
Mibi02g1406 292 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 PRINTS Major intrinsic protein family signature 92 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 PRINTS Major intrinsic protein family signature 129 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 PRINTS Major intrinsic protein family signature 178 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 19 286 IPR034294 -
Mibi02g1406 292 Pfam Major intrinsic protein 37 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 SUPERFAMILY Aquaporin-like 37 276 IPR023271 -
Mibi02g1406 292 ProSitePatterns MIP family signature. 110 118 IPR022357 -
Mibi02g1406 292 Gene3D Glycerol uptake facilitator protein. 29 292 IPR023271 -
Mibi02g1406 292 TIGRFAM MIP: MIP family channel proteins 48 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi02g1406 292 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1406 Mibi-ChrMibi02 14008683 14010040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1406 1 292 Major Intrinsic Protein MIP AT2G37170 78.082 7.95e-169 469