Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1397 ATGGTAATGAAAGTGATGCAACTTTCGCTTTCTCTTCTACACTATGCATCGAGACGTAAGACGTTTCAGGATAATCTTGAGAAATATACATTGATGGGTAGCATAGGAAGTCCCATGTCGAAGCCAGATTATAAGATGAATGCGAGAAACTTGTTGATGCAGAGAAAAACTCTTTCAAGGGTGTTTTCTGAGGATTATGATGCCTCTAAGAGACAGATATTCGATCCCAGGGGACCAAGAGTAAACAGATGGAACAAAATGTTCTTAGTCGCATGTTTGATTTCACTATTTGTGGATCCCTTCTTCTTTTACTTCCAAGAGGCTAAGAAAGACAAGTGCATTGCTATATCTACTGGACTCGAAGTTTCCCTTACCACAGTTCGGTCCATGGTTGATGCATTTTACATCATTCATATGTTTATTCGGTTCCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTTGGTAGAGGAGAGCTAATTATAGACCCCTCACAGATTGCTTCAAGGTACTTCCAAAAAGACTTCTGGCTTGATCTTCTGGCAGCCCTCCCTCTTCCTCAGGTGTTGATTATAGCTGTGATTCCAAATCTAAGGGGGTCAAGAATGATTGCTTCAAGGGAGACTTTTCGCCTTGTGATAATTTTCCAGTACTTGTTGAGGTTATATCATATATTCCCTGTTTCATCTGAAATAGTTAAGGCAAATGGAGTAATGATGGAAAAAACTTGGGCAGGGGCAGCATATAACCTTATGCTCTATATGCTAGCAAGTCATGTCTTAGGATCTTCCTGGTATCTATTGGCAATAGAGAGGCAGGATGAATGTTGGAAAAAAGCTTGTTATCTTGAGTTCCCACGTTGTCAATACCGTTATCTTGATTGCCAAAGTTTGAGTGATCCAGCCAGAGCAGCCTGGTTTAGATCAAGCAACCTATCAACTTTATGTGATAAGAATAGTGATTTCTTTCAGTTTGGTATTTTTGAAGATGCTCTCACTTTGCAAATGACAGACTCAAAGTTCTTAAGCCGATATTATTATTGCCTTTGGTGGGGCCTGCGGAATCTCAGCTCTCTGGGACAGAATCTCTTAACCAGCACTCACGTTGGAGAGATAAATTTTGCAGTAATTATTGCAATTCTTGGGTTGGTCCTTTTTGCACTTCTAATAGGAAACATGCAAACATACCTGCAATCAACTACCATGCGACTAGAAGAGTGGAGAATAAGACGCACAGACACAGAAAGATGGATGCATCACAGGCAATTACCTCATTACCTGAAGCGAAGTGTGAGACGCTATGAACAATTCAGATGGGTTGCTACGCGAGGAGTTGACGAGGAATCCATCCTTCGAGACCTCCCTGTGGATATCAGACGCGACATCAAACGCCACCTATGTCTCAACCTCGTTCGACAAGTTCCCCTGTTTGATCAGATGGACGAGAGGGTGCTAGACGCAATATGTGAAAGACTGAAACCTTCTCTGTGTATTCAAGGGACACTTCTGGTTCACGAAGGAGATCCTGTGACAGAAATGCGTTTCATCATTCGAGGACGTTTAGATTCTTGTACTACTAATGGTGGCAGAACCGGGTTTTTCAACTGTTGTAAAATCGGACCGGGTGATTTTTGTGGGGAAGAGCTATTACCATGGGCTTTGGACCCAAGTCCAAGTGCTGTTCTTCCTTCATCAACTCGCGCAGTGAAGGCCTTGACAGAAGTGGAAGCTTTCGCTCTCATGGCGGAAGATTTGAAATTTGTGGCGGCTCAGTTCAGGAGGCTACACAGCAAGCAACTTAGGCACACGTTTAGGCTTCACTCTCATCAATGGAGGGCATGGGCTGCTTGCTTCATACAAGCGGCTTGGTTCAGATATAAGAGAAGGAAAGAGGCGAGTGAGCTAATTTATAAAGAGTATTGTCATGATGCTGGTGAAACTAATAAGGTGCAACAATTTTCTGCGCCTTTACACTCGCAACCTCGGATTTCGAGTGCTACCACGTATAAAGGGGCCAGATTGGGATATAGTGGGAGGAAAGGTGGAAGCTTGCGATATGGTTCTGACCTTGATATTCTTGGTTCACTCAGGAAGCCCGTTGAGCCTGACTTCAATAATGTTGAAGATTGA 2130 0.431 MVMKVMQLSLSLLHYASRRKTFQDNLEKYTLMGSIGSPMSKPDYKMNARNLLMQRKTLSRVFSEDYDASKRQIFDPRGPRVNRWNKMFLVACLISLFVDPFFFYFQEAKKDKCIAISTGLEVSLTTVRSMVDAFYIIHMFIRFQTAYVAPSSRVFGRGELIIDPSQIASRYFQKDFWLDLLAALPLPQVLIIAVIPNLRGSRMIASRETFRLVIIFQYLLRLYHIFPVSSEIVKANGVMMEKTWAGAAYNLMLYMLASHVLGSSWYLLAIERQDECWKKACYLEFPRCQYRYLDCQSLSDPARAAWFRSSNLSTLCDKNSDFFQFGIFEDALTLQMTDSKFLSRYYYCLWWGLRNLSSLGQNLLTSTHVGEINFAVIIAILGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTERWMHHRQLPHYLKRSVRRYEQFRWVATRGVDEESILRDLPVDIRRDIKRHLCLNLVRQVPLFDQMDERVLDAICERLKPSLCIQGTLLVHEGDPVTEMRFIIRGRLDSCTTNGGRTGFFNCCKIGPGDFCGEELLPWALDPSPSAVLPSSTRAVKALTEVEAFALMAEDLKFVAAQFRRLHSKQLRHTFRLHSHQWRAWAACFIQAAWFRYKRRKEASELIYKEYCHDAGETNKVQQFSAPLHSQPRISSATTYKGARLGYSGRKGGSLRYGSDLDILGSLRKPVEPDFNNVED 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1397 709 Pfam Ion transport protein 84 403 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi02g1397 709 PRINTS EAG/ELK/ERG potassium channel family signature 389 398 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g1397 709 PRINTS EAG/ELK/ERG potassium channel family signature 439 446 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g1397 709 PRINTS EAG/ELK/ERG potassium channel family signature 256 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g1397 709 PRINTS EAG/ELK/ERG potassium channel family signature 345 362 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g1397 709 PRINTS EAG/ELK/ERG potassium channel family signature 139 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g1397 709 PRINTS EAG/ELK/ERG potassium channel family signature 371 382 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi02g1397 709 Gene3D - 85 400 - -
Mibi02g1397 709 Gene3D Jelly Rolls 474 594 IPR014710 -
Mibi02g1397 709 FunFam Cyclic nucleotide-gated ion channel 1 474 592 - -
Mibi02g1397 709 SUPERFAMILY Voltage-gated potassium channels 75 398 - -
Mibi02g1397 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 60 651 - -
Mibi02g1397 709 ProSiteProfiles cAMP/cGMP binding motif profile. 476 561 IPR000595 -
Mibi02g1397 709 CDD CAP_ED 476 607 IPR000595 -
Mibi02g1397 709 SMART cnmp_10 476 607 IPR000595 -
Mibi02g1397 709 Gene3D Helix hairpin bin 403 467 - -
Mibi02g1397 709 SUPERFAMILY cAMP-binding domain-like 406 598 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1397 Mibi-ChrMibi02 13918404 13922287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1397 46 706 Ion Channels AT2G28260 63.691 0.0 878