Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1393 ATGGAGTCTATAGCGAAGGCCAACGGTCAGCACCAGCAGAACAACGGATCCTTGTGCGTGGGCAATATTAATGGGAGCAGTGCGGGGGATCCGTTGAACTGGGGAGTAGCCGCGGAGGCGATGAAGGGGAGCCACCTGGAGGAGGTGAAGCGGATGGTGGCTGAGTATAGGAAGCCGGTGGTGAGGCTAGGAGGGGAGACTCTGACCATATCACAGGTGGCAGCCATTGCGGCTCATGACCAGGGGGTGAAGGTGGAGCTGTCCGAGACTGCCAGGGCAGGCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGAACAAGGGAACTGATAGTTATGGTGTCACCACTGGATTTGGTGCCACCTCTCACCGCAGGACCAAGCAGGGCGCTGCTTTGCAGAAAGAGCTCATCAGATTCTTGAACGCCGGAATATTCGGCAACGGCACAGAATCTTGCCAAACTCTGCCACACTCCGCCACAAGAGCCGCCATGCTCGTCAGAATCAACACCCTCCTCCAAGGTTACTCAGGAATCAGATTTGAAATCCTTGAAGCCATCACCAAATTCCTCAACCACAACATCACCCCATGCTTACCACTTCGTGGTACCATCACAGCCTCTGGCGATCTCGTCCCTCTTTCTTACATTGCCGGTTTGCTCACAGGAAGGCCTAATTCCAAAGCAGTGGGACCCAATGGAGAAGCACTTAATCCTAAGGAAGCTTTTCAATTGGCTGGAATTGAGTCTGAGTTCTTTGAATTGCAGCCTAAGGAAGGTCTTGCTCTTGTAAATGGTACTGCTGTTGGTTCTGGCTTGGCTTCTATGGTTCTGTTCGAGGCCAACATTCTTGCCGTCCTCGCTGAGGTTATTTCCGCAATTTTCGCTGAGGTGATGCAGGGGAAGCCTGAATTTACTGACCATTTGACACATAAATTGAAGCACCACCCTGGACAGATTGAAGCTGCTGCTATAATGGAACATATTTTGGATGGAAGCTCTTATGTTAAAGCTGCTAAGAAATTGCATGAGATGGATCCTCTGCAAAAGCCTAAGCAAGATCGCTATGCCCTTCGTACTTCACCACAATGGCTTGGCCCTCTTGTTGAGGTTATCAGATTCTCCACCAAGTCGATTGAGAGAGAGATCAACTCTGTAAACGACAACCCCTTGATTGATGTTTCAAGGAACAAGGCTCTTCATGGTGGTAACTTCCAGGGTACCCCAATTGGAGTTTCCATGGATAACACACGTCTGGCTATTGCTTCCATTGGAAAACTCATGTTTGCTCAATTCTCTGAGCTCGTCAACGACTTCTACAACAATGGTTTGCCTTCAAATCTCACTGCCAGCAGAAACCCCAGCTTGGACTATGGTTTCAAGGGGGCTGAAATCGCCATGGCTTCTTACTGCTCTGAGCTTCAATATCTTGCTAATCCTGTGACAAGCCACGTCCAAAGTGCAGAGCAACACAACCAAGACGTGAACTCTCTGGGTCTAATCTCGTCTAGGAAAACAAACGAAGCCATTGAGATCTTGAAGCTCATGTCTTCCACATTCTTGGTCGCTCTCTGCCAGGCAATTGACTTGAGGCACTTGGAAGAGAACTTGAAGAACACAGTGAAGAACACTGTCAGCCAAGTTGCCAAGAGAACTCTGACCACCGGCGTCAATGGAGAGCTTCATCCTTCTAGATTCTGCGAGAAGGATTTACTGAAAGTTGTTGATAGGGAACACGTGTTTGCCTATGCTGATGATCCTTGCAGTGCTCTTTACCCATTGATGCAGAAACTCAGGCAAGTTCTGGTGGATCATGCTCTGGCCAATGCTGAAAATGAGAAGAATACAAGCACATCAATCTTCCAAAAGATTGGAACTTTCGAGGAGGAGTTGAAGAATGTGTTGCCCAAGGAGGTTGAGAGTGCTAGAGTTGCATATGAGAGTGGAAATTCTGAAATTCCAAACAGGATTAAGGAATGCAGGTCGTATCCTCTGTACAAGTTTGTGAGGGAAGAGCTTGGAACTCAGTTGCTTACAGGAGAGAGGGTGATTTCTCCGGGAGAGGAGTGTGATAAGGTGTTCACAGCTTTGTGTCAGGGCAAGATCATTGATCCTCTTTTGGAATGTGTTGGCGAGTGGAATGGTGCCCCACTTCCTATCTGTTAA 2166 0.4861 MESIAKANGQHQQNNGSLCVGNINGSSAGDPLNWGVAAEAMKGSHLEEVKRMVAEYRKPVVRLGGETLTISQVAAIAAHDQGVKVELSETARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCQTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEALNPKEAFQLAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLAEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYADDPCSALYPLMQKLRQVLVDHALANAENEKNTSTSIFQKIGTFEEELKNVLPKEVESARVAYESGNSEIPNRIKECRSYPLYKFVREELGTQLLTGERVISPGEECDKVFTALCQGKIIDPLLECVGEWNGAPLPIC 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1393 721 Gene3D - 22 267 IPR024083 -
Mibi02g1393 721 FunFam Phenylalanine ammonia-lyase 534 655 - -
Mibi02g1393 721 Gene3D Fumarase/aspartase (Central domain) 268 716 - -
Mibi02g1393 721 PANTHER HISTIDINE AMMONIA-LYASE 25 721 IPR001106 -
Mibi02g1393 721 FunFam Phenylalanine ammonia-lyase 22 267 - -
Mibi02g1393 721 FunFam Phenylalanine ammonia-lyase 268 573 - -
Mibi02g1393 721 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 203 219 IPR022313 GO:0016841
Mibi02g1393 721 Pfam Aromatic amino acid lyase 68 544 IPR001106 -
Mibi02g1393 721 SUPERFAMILY L-aspartase-like 30 721 IPR008948 GO:0003824
Mibi02g1393 721 Gene3D - 534 655 IPR023144 -
Mibi02g1393 721 CDD PAL-HAL 66 531 IPR001106 -
Mibi02g1393 721 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 30 710 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1393 Mibi-ChrMibi02 13858456 13861819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1393 8 721 Monolignol Biosynthesis Gene Families AT2G37040 84.211 0.0 1278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1393 02 13858456 13861819 Mibi02g1393 02 13858456 13861819 ECH