Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1388 ATGTTCAAAACATGCCAATGACAACATGAGATGGATCCAGAAGAATACTTACAGAAGTGTTCCAATATGAAATGCCAAAGGGTTCAAGTAGATGGATCATTTGGTCCTGCTATTCAAGATGAATCCATAGATGTCGAACATTTGCTTGCAGAACCTAGAAGTGATCATGTTTCAGTGGATGGGATTTTGTATTTTCATGAGGAGAATGTAGGCAAATGCTGTGCTGTCGAAAATCTTTCCCATGGTTTAGAGTTTGGTCTAAGAACAAGTATAGGTGGATCAGATTCTCACACGACTTTGAATGGAAATGATTTGGAACTTGAGGTGCTTGGTCGGTTGCTGAAAGATGTTGAAAATGATGGTCTTAATGCGACAGATGGGTTTTCATGTGAAGATTATCTTTTGGATTTTGAATTTGGGGACAAAGCTGTGGATCTTTGTGGAGAATCACTATTGCAAAGTTCAAGCTTTGAAAGTCATTCTCCAGGATTAAGTGGAAGTAGCAATGGTGTTGGTGGGGCATTTGAATCAGCAAAAGTGGCCGTTGAACAATCTGAATATAAAAATAATTTTCTAGATGATAGAAAAGTAACCCATGACTTGCATGGTGCCTCCAGGAACATTTCCTCTCAAACATCAATTGAAGATGGAATTTGCAATTCACCTGATATGAAGCATCTAAATGAGTTGGATATTGACCCCCCTTTATCAGATAGTGTATTGTCTTGCAAGAAGGAGAAGAGTTCTGTAGACGCATGTCAAACTGCTGCAGTTAGAGAGAAGAGATGCCGTAAGCCTACTGTGAGGTATATTGAAGAATTTTCAAATTTGAGGTCAAAAGAAAAGGTTTTGAATTCTGCAACCAAAAGTAAACCCCTGAGTTTGGCATCACACCACAAGTCTCATCATGTAAGGTTTAGAGCATTGAGACACATTCAAGGCAAGAATTCTGATAGTCTGATGAGTGATATGGCACTTCCTGAGTTGCAGGTTCATAAGCAATGTCTTAAGAATGAGGGACTTGAGTATGATGAAGAGTCTAATACAACTGAGTCCGAGGATGAATGTGTAACTCCAACAAGATATGGGAAAAATGATCGGAGGAAGCATCAAAGAATGTGGACTTTATCTGAAGTGATCAAGTTGGTTGATGGCATTTCTGAATATGGAGTTGGCCGATGGACTGATATAAAGCGTGTTCTGTTTTCTTCCTCCAGTTATCGTACACCGATAGACCTTAGGGACAAGTGGCGGAATCTTCTAAGAGCCAGTTCAGCACATAAATTTAACAGCAAAGAGACTGAACAAAAGCAGCAGCATGCCTTGCGCTCCTTACCGAGCTATGTGCTTCGCCGAGTCCATGAACTGGCTAAAATTCATCCCTACCCGAGGGAGCGATCTTCAAAGGAATCATTGGTGGGCCATGTTGACTCCCTTATCCTTCCAACTGGGAAAAAAGGGGGTCCTAGCAAAAGAAATGTGCGTAGGAAGAAGTGTACTTGA 1503 0.4079 MFKTCQXQHEMDPEEYLQKCSNMKCQRVQVDGSFGPAIQDESIDVEHLLAEPRSDHVSVDGILYFHEENVGKCCAVENLSHGLEFGLRTSIGGSDSHTTLNGNDLELEVLGRLLKDVENDGLNATDGFSCEDYLLDFEFGDKAVDLCGESLLQSSSFESHSPGLSGSSNGVGGAFESAKVAVEQSEYKNNFLDDRKVTHDLHGASRNISSQTSIEDGICNSPDMKHLNELDIDPPLSDSVLSCKKEKSSVDACQTAAVREKRCRKPTVRYIEEFSNLRSKEKVLNSATKSKPLSLASHHKSHHVRFRALRHIQGKNSDSLMSDMALPELQVHKQCLKNEGLEYDEESNTTESEDECVTPTRYGKNDRRKHQRMWTLSEVIKLVDGISEYGVGRWTDIKRVLFSSSSYRTPIDLRDKWRNLLRASSAHKFNSKETEQKQQHALRSLPSYVLRRVHELAKIHPYPRERSSKESLVGHVDSLILPTGKKGGPSKRNVRRKKCT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1388 500 MobiDBLite consensus disorder prediction 478 500 - -
Mibi02g1388 500 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 366 425 IPR017930 -
Mibi02g1388 500 SMART sant 370 423 IPR001005 -
Mibi02g1388 500 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 14 477 - -
Mibi02g1388 500 Pfam Myb-like DNA-binding domain 374 421 IPR001005 -
Mibi02g1388 500 Gene3D - 360 471 - -
Mibi02g1388 500 SUPERFAMILY Homeodomain-like 368 456 IPR009057 -
Mibi02g1388 500 ProSiteProfiles Myb-like domain profile. 366 421 IPR001005 -
Mibi02g1388 500 CDD SANT_TRF 372 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1388 Mibi-ChrMibi02 13832677 13836385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1388 357 421 Single Myb Histone (SMH) Gene Family AT1G15720 39.706 5.93e-06 46.6