Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1387 ATGTTGATAGCCACCGCGACGTTGTCATGCATACTTCCAACTCCCTATTCGCATATTGCTGTTCATTTCACTGTCACAGTGGGTAGATGGTTAGATGGCACGTGGCTTCCAACTCCAATGTTTCACAAAATTAAATTACGCATCTACCATCTTTCGACGGCAGAAAGGTTTTCGCGATCAGATTATCTATCACTTGCTGGAGATCAATCGGTTGCAATGAAGTGTTTTCCATTTCACTATGGAGAGAAGAAGGAAGAACCGATGAGCGTGAAGTCAGCATCGGGTCGGTCCAACAGTTCCACAAATGGTGAGGATGATGTGAGAAGATCCGGTTCTGAATTGAATTCTAAGGGTCCTTCAGAACACAGTACAGAGTCCCTTAGGAGGACTACATTCCCCAATATGTCTCAAAGACCCAGCAACTTAAAAGTTTTCACTGTTCCTGAACTTAGATCAGCCACAAAGAGTTTCAGTCGCTCTGTCATGCTTGGAGAGGGAGGGTTTGGATGCGTATACAAGGGATCGATCAAGAGTGGAGAGGATCCTAACAAAAAAATTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGCCATAAGGAATGGGTGACAGAAGTTAATGTTCTGGGTATTGTTGAGCACCCCAATCTGGTAAAACTAGTGGGTTACTGTGCGGATGATGATGAAAGAGGAATCCAGCGACTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCACTTATCACCCCGTTCAGAGAATCCTCTCTCATGGAATAGAAGATTGAAAATAGCTGAAGATGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTCAGAGACTTCAAATCTTCAAACATCCTCTTGGATGAGCAATGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCTACGGCGGTTGTAGGAACAATGGGATATGCAGCTCCAGAATATGTTCAAACTGGCCGGCTGACATCCAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCGCCCTTTTGATCGAAATCGTCCAAAGGGTGAGCAGAAACTCTTGGAATGGGTGAGGCCATACTTATCAGACGGAAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAACACGTTTTTAAGTCAGCTCAAAGACTTGCTATTGTAGCTAACCGATGTTTAGTCAAAAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAAATTGCACAATCTTCATTGAGTGCAAGTCCAGAACTACCCCTGAAGAATTTTGCATCAGCGCAAGCGTCAAAAGAAACCAAATTAAAGAACAAGAGAAGGGTTATGAACCTGAAACCTGTAGAAACTAATTGGTTTTTTAGAATATGGAGACCTAAACACCAAAGAGCAAGTTGA 1494 0.429 MLIATATLSCILPTPYSHIAVHFTVTVGRWLDGTWLPTPMFHKIKLRIYHLSTAERFSRSDYLSLAGDQSVAMKCFPFHYGEKKEEPMSVKSASGRSNSSTNGEDDVRRSGSELNSKGPSEHSTESLRRTTFPNMSQRPSNLKVFTVPELRSATKSFSRSVMLGEGGFGCVYKGSIKSGEDPNKKIEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLSWNRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLERKHVFKSAQRLAIVANRCLVKNPKNRPKMSEVLDMVNQIAQSSLSASPELPLKNFASAQASKETKLKNKRRVMNLKPVETNWFFRIWRPKHQRAS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1387 497 Pfam Protein kinase domain 159 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1387 497 FunFam Serine/threonine-protein kinase BIK1 123 242 - -
Mibi02g1387 497 ProSiteProfiles Protein kinase domain profile. 157 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1387 497 MobiDBLite consensus disorder prediction 113 138 - -
Mibi02g1387 497 FunFam Serine/threonine-protein kinase PCRK2 243 451 - -
Mibi02g1387 497 PANTHER OS01G0588500 PROTEIN-RELATED 113 441 - -
Mibi02g1387 497 SUPERFAMILY Protein kinase-like (PK-like) 132 438 IPR011009 -
Mibi02g1387 497 ProSitePatterns Protein kinases ATP-binding region signature. 163 191 IPR017441 GO:0005524
Mibi02g1387 497 MobiDBLite consensus disorder prediction 87 138 - -
Mibi02g1387 497 Gene3D Transferase(Phosphotransferase) domain 1 243 455 - -
Mibi02g1387 497 Gene3D Phosphorylase Kinase; domain 1 129 242 - -
Mibi02g1387 497 CDD STKc_IRAK 163 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1387 Mibi-ChrMibi02 13807960 13813285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1387 73 435 Glycoside Hydrolase AT3G07070 43.902 1.03e-91 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi02g1387 Pkinase 1.2e-47 CL0016