Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1366 ATGGGAAGAGCTCCTTGCTGCGACAAGTCCAATGTAAAGAAGGGACCATGGTCTCCTGAAGAAGATGCACAGCTCAAAGACTACATACAGAAACATGGAACTGGAGGCAACTGGATTGCTTTCCCTCAAAAAGCTGGTCTGAAAAGATGTGGGAAAAGCTGTAGATTAAGGTGGCTAAACTATCTCAGGCCTGACATAAAACACGGCGAGTTCTCTGATCATGAAGATAAGATCATCTGCAGCCTCTTTGCCAGCATCGGAAGCAGGTGGTCAGTGATAGCATCTCAGTTGCCTGGAAGGACTGATAATGATATCAAGAACTACTGGAACACCAAGCTTAAGAAGAAGATGATGTCGGCCATGAATTCTTCTTCTTCAGCTCATTATCATCACAACCAAGCTGCCCTTTACCATTCAACTCCATCTTCATCCTCATCTTCAGCTTCTTCACCATTATCATTCACAGAAAACACCAACAATTCTTACTACCACCCAGCTCCTTATAATACTTCTTCATTCTCATCAGGCTCTGATCATCATCAATCCATTTCCTTCTCTTCGGCGAGTTTTTTGAATGGCCATTCCTCTGCATCAGCTGGTTCTTTTTATCAACCCCAAGAAAGCTTGATGGTGGGTCCCATTGAGCTGGTCGCAGCTAGTTGCAGCTCTTCAAATGGGAGCCATAATAGTAGCAGCCAGATGATGAGTAGTCACCATGTGAAAGAAGCTGAAGCTACTGGATTTGGAGGAGATCAAGGAAATATGGTGGAACAAATGATTGCTGCCAGTAATAGTATTGGGATGGGAATGGAAGAAACCCAGAAGGTGATGGTGTGTGATGGCAACTACGTGAATGGACTGTGGGAACAGAATCCGCCATCAGATTATGGGATTGAAGAAATTAAGCAGCTAATAAGTTCTAGTAATAATAGTTGCAGCAATTTCTTGTTTGATGAAAACTTGACACAGAAAACGGCCTTGTACTACTATTGA 993 0.432 MGRAPCCDKSNVKKGPWSPEEDAQLKDYIQKHGTGGNWIAFPQKAGLKRCGKSCRLRWLNYLRPDIKHGEFSDHEDKIICSLFASIGSRWSVIASQLPGRTDNDIKNYWNTKLKKKMMSAMNSSSSAHYHHNQAALYHSTPSSSSSSASSPLSFTENTNNSYYHPAPYNTSSFSSGSDHHQSISFSSASFLNGHSSASAGSFYQPQESLMVGPIELVAASCSSSNGSHNSSSQMMSSHHVKEAEATGFGGDQGNMVEQMIAASNSIGMGMEETQKVMVCDGNYVNGLWEQNPPSDYGIEEIKQLISSSNNSCSNFLFDENLTQKTALYYY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1366 330 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi02g1366 330 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi02g1366 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Mibi02g1366 330 Gene3D - 6 68 - -
Mibi02g1366 330 SMART sant 13 64 IPR001005 -
Mibi02g1366 330 SMART sant 67 115 IPR001005 -
Mibi02g1366 330 CDD SANT 16 62 IPR001005 -
Mibi02g1366 330 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi02g1366 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Mibi02g1366 330 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi02g1366 330 FunFam Transcription factor RAX2 70 136 - -
Mibi02g1366 330 Gene3D - 70 137 - -
Mibi02g1366 330 PANTHER OS09G0431300 PROTEIN 1 274 - -
Mibi02g1366 330 FunFam Transcription factor RAX3 7 68 - -
Mibi02g1366 330 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1366 Mibi-ChrMibi02 13598556 13599810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1366 1 118 MYB Transcription Factor Family AT5G57620 83.898 2.98e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g1366 Myb_DNA-binding 1.2e-13 CL0123