Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1357 ATGCAAGGAGAGATTTTGCGTAAAGGGGCTTGGCTCCAAGAAGAAGACGAGCAACTCACCACTTTTGTTACTTGTCTTGGAGAACGAAGATGGGATTCCCTTGCCAAAGTAGCTGGACTGAGTAGAAGTGGTAAAAGTTGCAGGTTGAGGTGGATGAACTATCTTCGTCCAAATCTGAAGCATGGCCCTTTTAGTATTGAAGAAGAGCGACTCCTTATTCAACTTCACCAGCAATGGGGTAACAAGTGGTCAAAAATTGCACGCAGTCTCCCTGGAAGAACTGACAATGAAGTCAAGAATTATTGGAGAACTCATTTAAGAAAGAATAAAGCATGTGTTAAACAACAAGATGAGTTCCAATATAAAGCAGAAGACACAGAACATGGTGGCTTGAGTGAGGAAAACATGAATGATAACGCTTGCAAGGATTATAATCAAGTGAACCTTGAATGCCAAGAAAATGTTGGGGAGACTAAGGATAATTCTTTTCAAGCTTCTCCACCATCAGAATGGGAAATGCCAGGTTCACCCTATGAGATTCGAGTATCAGATTGGATAGCGGAATTGCAAAATTATCAGAATGAAATAGAATATGAACATCATTGTAACAAGATACAGTCAACTGAATCTTGCTATTCTACGTGGTTTGACTCTGATACGTGGGCTTATTCTTATTCTGGTTCCATCTGGGACATGAATTGA 702 0.4031 MQGEILRKGAWLQEEDEQLTTFVTCLGERRWDSLAKVAGLSRSGKSCRLRWMNYLRPNLKHGPFSIEEERLLIQLHQQWGNKWSKIARSLPGRTDNEVKNYWRTHLRKNKACVKQQDEFQYKAEDTEHGGLSEENMNDNACKDYNQVNLECQENVGETKDNSFQASPPSEWEMPGSPYEIRVSDWIAELQNYQNEIEYEHHCNKIQSTESCYSTWFDSDTWAYSYSGSIWDMN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1357 233 Gene3D - 8 60 - -
Mibi02g1357 233 FunFam Myb transcription factor 8 60 - -
Mibi02g1357 233 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Mibi02g1357 233 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
Mibi02g1357 233 CDD SANT 10 55 IPR001005 -
Mibi02g1357 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Mibi02g1357 233 CDD SANT 63 106 IPR001005 -
Mibi02g1357 233 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Mibi02g1357 233 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Mibi02g1357 233 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Mibi02g1357 233 SMART sant 60 108 IPR001005 -
Mibi02g1357 233 SMART sant 7 57 IPR001005 -
Mibi02g1357 233 Gene3D - 62 132 - -
Mibi02g1357 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Mibi02g1357 233 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 179 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1357 Mibi-ChrMibi02 13484166 13485174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1357 7 108 MYB Transcription Factor Family AT5G59780 65.686 1.91e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g1357 Myb_DNA-binding 4.7e-12 CL0123