Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1354 ATGTTAACTCAGGGTGTCTCTCCACTAGATGACGTTTCTCTTTCTGAGATAGGATGTGGCCGTTACGGGTGTTCACACTATCGAAGGAGATGCAGGATAGTAGCACCTTGCTGCAATGAAATATTCGATTGTAGGCATTGCCATAATGAATCTAAGAATTCGATTGAACTGGACCCTGTTGATCGCCATGACATTCCTCGTCACGATTTAAAAAGGGTTATCTGTTCCTTGTGTGGCACCGAGCAAGATGTTCAACAGATGTGCATTCGGTGTGGTGTTTGCATGGGGAAGTACTTCTGCTCTAAGTGCAAGTTTTTTGATGATGATGTATCAAAGAATCAATACCATTGCAATGAATGTGGTATCTGCAGAATTGGAGGGGAGGAGAATTTTTTCCACTGCAATAAATGTGGATGTTGCTATTCAACACAGATGAAGGACTCACACCGTTGTGTGGAAAAAGCTATGCATCACAATTGTCCTGTTTGCTTTGAGTTTCTTTTTGATACCACAAAAGACATTACTGTATTGCCATGTGGTCACTCTATCCATCTGGAATGTGTGAGAGAAATGGAGCAGCATTTCCAGTATTCTTGTCCTGTTTGCTCAAAATCTTTTTGTGATATGTCACGTGTGTGGGAGAGACTGGATGATGAGATTGCATCAACACCTATGCCAGAGATATATCATAATAAGATGGTCTGGATTCTGTGCAATGATTGTGGGGAAACGTCAGAGGTGAGCTTTCATGTTTTGGCGCATAAGTGTGTAAAATGCAAATCCTATAACACCAGACAAACGCAAGGGGGACCTGCATCATGCTCATCCAACATTGAAGAGTTGCTGCAATGA 852 0.4202 MLTQGVSPLDDVSLSEIGCGRYGCSHYRRRCRIVAPCCNEIFDCRHCHNESKNSIELDPVDRHDIPRHDLKRVICSLCGTEQDVQQMCIRCGVCMGKYFCSKCKFFDDDVSKNQYHCNECGICRIGGEENFFHCNKCGCCYSTQMKDSHRCVEKAMHHNCPVCFEFLFDTTKDITVLPCGHSIHLECVREMEQHFQYSCPVCSKSFCDMSRVWERLDDEIASTPMPEIYHNKMVWILCNDCGETSEVSFHVLAHKCVKCKSYNTRQTQGGPASCSSNIEELLQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1354 283 ProSiteProfiles Zinc finger CHY-type profile. 17 93 IPR008913 GO:0008270
Mibi02g1354 283 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 19 268 - -
Mibi02g1354 283 SMART ring_2 160 202 IPR001841 -
Mibi02g1354 283 ProSiteProfiles Zinc finger RING-type profile. 160 203 IPR001841 -
Mibi02g1354 283 Pfam CHY zinc finger 24 105 IPR008913 GO:0008270
Mibi02g1354 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 205 IPR013083 -
Mibi02g1354 283 ProSiteProfiles Zinc finger CTCHY-type profile. 95 159 IPR017921 -
Mibi02g1354 283 SUPERFAMILY Zinc hairpin stack 96 153 IPR037275 -
Mibi02g1354 283 SUPERFAMILY RING/U-box 157 210 - -
Mibi02g1354 283 MobiDBLite consensus disorder prediction 264 283 - -
Mibi02g1354 283 Pfam Zinc-ribbon 207 265 IPR039512 -
Mibi02g1354 283 SUPERFAMILY CHY zinc finger-like 21 95 IPR037274 GO:0008270
Mibi02g1354 283 FunFam RING finger and CHY zinc finger domain-containing protein 1 231 276 - -
Mibi02g1354 283 Pfam Ring finger domain 159 202 IPR001841 -
Mibi02g1354 283 Gene3D - 231 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1354 Mibi-ChrMibi02 13453523 13456307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1354 22 277 C2H2 Transcription Factor Family AT3G18290 39.394 9.92e-54 186