Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi02g1350 | ATGGCGGTTCCAGGTAGGCGCAATGGTTTCAACAGCGACGAAGACGACGATAACTTTGAAGATGACAATGCTCTCTTTGAAGATAATAATAATAATAATGGCTTTTTACACCTTGATGCCTCCGACACCCCTCCCCATCTTCGCGACCTAGCCGCCGCCTCTCAGTCTGGTCACCTCCATAATCTCCGCCTCGCTCTAGATAACTTGACTGGAAGTATTGATGATCCTGTGGAAGATGGGGACACAGCTCTACATCTGACCTGCTTATATGGCCATTTATCGTGCGTTCAGCTACTTCTGGAAAGAGGAGCAAACATTGAGAGTACGGACGAAGATGGTGCAATTCCATTACATGATGCTTGTGCAGGAGGGTATGCAGAGATAGTCCAACTGTTACTTAACAGAGCTGATAATCCAGAGCATATAAGGAGGATGCTTGAATCAGTTGATTCAGAGGGTGATACTCCGCTCCATCACGCTGCTAGAGGCGAACATGTTGATGTTATTAGATTGTTGCTGTCTCATGGCGCATCTCCCACAAAGGCAAACTTATATGGGAAGACCCCAGCAGAATTACCTGATCATGGCACTGACGCAAGGAGATTGCTGGAAGCCGCTGGTGCTACTTCCATACCATCTCAATAG | 645 | 0.4713 | MAVPGRRNGFNSDEDDDNFEDDNALFEDNNNNNGFLHLDASDTPPHLRDLAAASQSGHLHNLRLALDNLTGSIDDPVEDGDTALHLTCLYGHLSCVQLLLERGANIESTDEDGAIPLHDACAGGYAEIVQLLLNRADNPEHIRRMLESVDSEGDTPLHHAARGEHVDVIRLLLSHGASPTKANLYGKTPAELPDHGTDARRLLEAAGATSIPSQ | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1350 | 214 | ProSiteProfiles | Ankyrin repeat region circular profile. | 112 | 135 | - | - | |
| Mibi02g1350 | 214 | ProSiteProfiles | Ankyrin repeat profile. | 112 | 144 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | SUPERFAMILY | Ankyrin repeat | 50 | 191 | IPR036770 | - | |
| Mibi02g1350 | 214 | SMART | ANK_2a | 79 | 108 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | SMART | ANK_2a | 112 | 141 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | SMART | ANK_2a | 152 | 181 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | Gene3D | - | 44 | 209 | IPR036770 | - | |
| Mibi02g1350 | 214 | PANTHER | SOWAH (DROSOPHILA) HOMOLOG | 152 | 207 | - | - | |
| Mibi02g1350 | 214 | Pfam | Ankyrin repeat | 153 | 182 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | ProSiteProfiles | Ankyrin repeat profile. | 152 | 184 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | ProSiteProfiles | Ankyrin repeat region circular profile. | 152 | 178 | - | - | |
| Mibi02g1350 | 214 | FunFam | BRCA1-associated RING domain protein 1 | 44 | 211 | - | - | |
| Mibi02g1350 | 214 | ProSiteProfiles | Ankyrin repeat profile. | 79 | 111 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | Pfam | Ankyrin repeats (3 copies) | 52 | 137 | IPR002110 | GO:0005515 | |
| Mibi02g1350 | 214 | ProSiteProfiles | Ankyrin repeat region circular profile. | 79 | 111 | - | - | |
| Mibi02g1350 | 214 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1350 | 78 | 195 | Ion Channels | AT2G25600 | 32.653 | 1.30e-11 | 61.6 |