Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1333 ATGAAGCAAGAATCGGAATCGGAGATTCAGACTCTGAATCAATGTGATGAAGCCGTTCCAAGTCCACCTTCTGAAATTGACGCTTGTTCAGAGTCTCAGTTGATGTTTTCTGTGCACGTTTCTGAGGATCCCGGCGGTGTAGTTAAAAGTTCTCTTGTGGAGGGTTTTATTGTTTATACTCGATCAAAGAAGTCTCGGCATTTGTGCAATGGGTCTTCCGAGAATGGGTCGCTCAAGAGACTCAAGACATCTAGAGATCGGGATGTAGAGGTAGACAATGTAGTAGCAAATGTCGAATCTGAAGTAGTTTGCCATTTGGAAAAGCGTATTAGGTGTACTGAATTGAAGAACGAGCCAGCGCAGTTTCTTGCTGGGGAACTTGGCTCCATTAAGCTTTTTAACGGTGAGGTGCATATGAATGTAGATAAAACAGTGAGGCGATTTACGCGATCAGCATTGAAACCAAAGGTTGAATGCAGTGATGAGACGGGGATTGCTCAAGAAGCTGCCCAGGCTGAAAATAATTCGGAATTAAAAAGGTCCAAAAAGTTCGTGGTCAGCAAGAAGCCTATGACTGTCAAGGAACTCTTCGATACTGGTTTACTGGATGGGGTTTCAGTAGTTTATATGGGTGGCAAGGCTTCTCGCCTGCGGGGTGTTATTAAAGATGGAGGGATCTTGTGCTTTTGTTGTATGTGCAATGGGCGCAGGGTTATCCCACCTTCGCAATTTGAGATTCATGCTTGCAAATCATACAAGCGAGCAGCACAGTATATTTGTTTTGAAAACGGAAAGAGCTTGCTTGAATTATTGAGAGCTTGCAGAGGAACTCCGCTGCATTCATTGGAAACGGCAATTCAAAATTTTGTTTGTTCTCCATCTCAAGAGAAATATTTTACATGTAGAAGGTGCAAAGGATGTTTTCCATCTTCACGATTGGAAAAAGTAGGGCCTATATGTAAATCTTGTGTGGAATCAAAGGAATCTGAAGGCAGTTTAATTGGTGCGGTTGGCAAAAGAGTCAGGTCTCCTAGACCAGTTCCAGCTTCCAAACCATTAAGTGATTCTAAGCTGTGTAACTCGTTGCAAATTAACAAACATTGGAAGAAAAGAACAAGGACAACAAATCGGGTTAGCAGCTCAAAGTCTTCTGAGACTGCTTCTGTGCCTGTGCTATCACAAAAGAAGTCTCTGCAGAGGTTAAAGAAGAAGTTTCGGTTGCATAAATTAGTTTTTGAAGAAGGTGGATTGCCTGATGGAACAGAAGTAGCTTATTATGGACGTGGACAGAAATTGCTAGAGGGTTATAAGAAGGGCTCTGGAATACTTTGTCGGTGCTGCAACACACAGGTTAGCCCATCACAATTTGAGGTCCATGCAGGCTGTGCTTCTCGCAGGAAACCTTATGCATACATCTACACTTCAAATGGGGTTTCTCTCCATGAATTAGCAATTTCTCTTTCAAAAGGCCGCAAGTACTCTTCAAAGGACAATGATGATCTTTGCGTTATTTGTTGGGATGGTGGAAACCTGTTGCTTTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTCTATCAAGCATTCCACGTGGTGATTGGTACTGTAAGTTTTGCCAAAACATGTTCCAGAGGGAAAGATTTGTAGCACACAATGCCAATGCTGTGGCTGCTGGAAGGATTGATGGGGTTGATCCTATTGAACAGATAACCAAGAGATGCTTTCGCATTGTTAAAGACATTGAAGCTGAGCTGAGTGGCTGTGCTTTATGCAGGGGTTATGACTTCAGCAAGTCAGGATTTGGTCCTCGCACAATTTTACTCTGCGACCAGTGTGAAAAGGAATATCATGTAGGCTGTTTGAGGGATCATAAGATGGCATATTTGAAGGCATTGCCAGAAGGAAATTGGTTTTGTTGTACGGATTGCAACAGAATACATTCTACTTTGCAGAAGTTCTTGATTAGGGGGGCTGAGAAACTTCCTGACTCCTTCGTGAATGTTATAAAGACAAAGCAAGCGGAAAAGGGTCTGCAGTCTTTCAATGATGTTGATGTAAGATGGAGGCTTCTTAATGGCAAAATTGCTTCTCATGAAACCAGGCCATTGCTATCAGAGGTTGTTTCAATCTTTCATGAATGCTTTGATCCTATAGTTGATTCATCTAGTGGACGTGACCTTATCCCAGCCATGGTTTATGGAAGGAACGTACGGAGTCAAGAGTTTGGAGGAATGTATTGTGCAATATTATCGGTCAATTCAACTGTTGTATCAGCTGGCATGCTTCGAATTTTTGGTGAAGATGTGGCCGAACTTCCTTTAGTTGCAACAAGTAATGGTAATCATGGGAAGGGCTATTTCCAATTGCTCTTCACTTGCATTCAGAGACTGCTTGCCTTTTTGAACGTAAAGATGCTTGTGCTACCAGCTGCTGAAGAAGCAGTATCCATATGGACAGATAAATTTGGGTTCAACAAGATGAAACCAGAGCAGATCAGCAACTGTAGAAAGAACTACAGTCAGATGGTGACATTCCAAGGGACATCCATGCTTCAAAAAGTGGTTCCGCCCTGTCAAGTCATTAATGTGAAAGAGGAAAGCTTGTAG 2613 0.4252 MKQESESEIQTLNQCDEAVPSPPSEIDACSESQLMFSVHVSEDPGGVVKSSLVEGFIVYTRSKKSRHLCNGSSENGSLKRLKTSRDRDVEVDNVVANVESEVVCHLEKRIRCTELKNEPAQFLAGELGSIKLFNGEVHMNVDKTVRRFTRSALKPKVECSDETGIAQEAAQAENNSELKRSKKFVVSKKPMTVKELFDTGLLDGVSVVYMGGKASRLRGVIKDGGILCFCCMCNGRRVIPPSQFEIHACKSYKRAAQYICFENGKSLLELLRACRGTPLHSLETAIQNFVCSPSQEKYFTCRRCKGCFPSSRLEKVGPICKSCVESKESEGSLIGAVGKRVRSPRPVPASKPLSDSKLCNSLQINKHWKKRTRTTNRVSSSKSSETASVPVLSQKKSLQRLKKKFRLHKLVFEEGGLPDGTEVAYYGRGQKLLEGYKKGSGILCRCCNTQVSPSQFEVHAGCASRRKPYAYIYTSNGVSLHELAISLSKGRKYSSKDNDDLCVICWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCKFCQNMFQRERFVAHNANAVAAGRIDGVDPIEQITKRCFRIVKDIEAELSGCALCRGYDFSKSGFGPRTILLCDQCEKEYHVGCLRDHKMAYLKALPEGNWFCCTDCNRIHSTLQKFLIRGAEKLPDSFVNVIKTKQAEKGLQSFNDVDVRWRLLNGKIASHETRPLLSEVVSIFHECFDPIVDSSSGRDLIPAMVYGRNVRSQEFGGMYCAILSVNSTVVSAGMLRIFGEDVAELPLVATSNGNHGKGYFQLLFTCIQRLLAFLNVKMLVLPAAEEAVSIWTDKFGFNKMKPEQISNCRKNYSQMVTFQGTSMLQKVVPPCQVINVKEESL 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1333 870 MobiDBLite consensus disorder prediction 370 389 - -
Mibi02g1333 870 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 586 648 - -
Mibi02g1333 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 586 648 IPR013083 -
Mibi02g1333 870 MobiDBLite consensus disorder prediction 1 18 - -
Mibi02g1333 870 CDD PHD1_AIRE 501 541 - -
Mibi02g1333 870 Pfam PHD-finger 502 543 IPR019787 -
Mibi02g1333 870 ProSiteProfiles Zinc finger PHD-type profile. 499 544 IPR019787 -
Mibi02g1333 870 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 488 565 - -
Mibi02g1333 870 MobiDBLite consensus disorder prediction 1 25 - -
Mibi02g1333 870 ProSitePatterns Zinc finger PHD-type signature. 502 541 IPR019786 -
Mibi02g1333 870 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 740 830 IPR016181 -
Mibi02g1333 870 SUPERFAMILY FYVE/PHD zinc finger 488 543 IPR011011 -
Mibi02g1333 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 488 570 IPR013083 -
Mibi02g1333 870 PANTHER AUTOIMMUNE REGULATOR 101 855 - -
Mibi02g1333 870 SMART PHD_3 501 542 IPR001965 -
Mibi02g1333 870 SMART PHD_3 589 646 IPR001965 -
Mibi02g1333 870 Pfam Tify domain binding domain 219 274 IPR032308 -
Mibi02g1333 870 Pfam Tify domain binding domain 435 485 IPR032308 -
Mibi02g1333 870 SUPERFAMILY FYVE/PHD zinc finger 582 645 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1333 Mibi-ChrMibi02 13176073 13187588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1333 157 864 PHD Transcription Factor Family AT2G36720 52.833 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mibi02g1333 TDBD 4.5e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2681 06 46825563 46829434 Mibi02g1333 02 13176073 13187588 CCT