Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1328 ATGAACAATAACAGTGAAGGGCAAAACCAACCTGGCTACATTGTGAACCCTTTTATCATATCTGGCGCCGGCATCATCTGTTCCGGCATCGCCTTAGTCACTTACCACTTCTTCATCGTCCGCCTCTGCCTTCAAAATCGCCAGCAATCGCAACAAAACACTCAGTCCATAACTCCACCGGCCAACGACAACACTCCCTCAGGCGTTGACCCTGACACCCTCAAGAAAATCCCAATCCTTCCCTACTCTTACATTAAAGGTGACACCTTTCGTTTGGACCAAACTGATTGTGCTATTTGCTTGGGCGAATTGTATGAAGGAGACAAGGTTCGTTTATTGCCTTCTTGTAGCCATGTTTTTCACACCGAATGTATTGATCCCTGGTTCGTTCACAACTCCAATTGTCCCAATTGTCGTGCCCCATTAGTTATATCGCCTCCTCCGCCGCCGCCGCCGGTGGTGGTGGTGGTGTCTTCAGAAACCGTCGTTGATGCTGAAGTAAATAATGCGAGTCGTGTACAGAGTGATCATAGCATTGTTGTTTCTTATGGGTCTACGTCACGAGCCTCTCCTGTGCCGGAGAATTCGCCTCAGGATTTCATGATGGGGATGAAGAGGTCTGTTTCCTTGGATAATTCGTCCTATGTTTCTGTCTGCATTGAAAGAGACGAGGATCATAGAGCTTCTTCTTCTTCTTGCTCTTCTTCGCCGCCCTCTGTTTCTGCTGCTGCTGGGACTACTGGGAATTCTAATGCGCTTGATCAGATTTCGTCCATGTTCATGGTGTCTTTTACCCAATTTCGGAACAGTAGAAATGACAGATCCAAAGGCGTTCTACCGAATTGA 846 0.474 MNNNSEGQNQPGYIVNPFIISGAGIICSGIALVTYHFFIVRLCLQNRQQSQQNTQSITPPANDNTPSGVDPDTLKKIPILPYSYIKGDTFRLDQTDCAICLGELYEGDKVRLLPSCSHVFHTECIDPWFVHNSNCPNCRAPLVISPPPPPPPVVVVVSSETVVDAEVNNASRVQSDHSIVVSYGSTSRASPVPENSPQDFMMGMKRSVSLDNSSYVSVCIERDEDHRASSSSCSSSPPSVSAAAGTTGNSNALDQISSMFMVSFTQFRNSRNDRSKGVLPN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1328 281 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 13 161 IPR044675 -
Mibi02g1328 281 MobiDBLite consensus disorder prediction 227 247 - -
Mibi02g1328 281 MobiDBLite consensus disorder prediction 230 247 - -
Mibi02g1328 281 SMART FANCL_C_2 93 147 - -
Mibi02g1328 281 MobiDBLite consensus disorder prediction 53 69 - -
Mibi02g1328 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 144 IPR013083 -
Mibi02g1328 281 Pfam Ring finger domain 96 139 IPR001841 -
Mibi02g1328 281 MobiDBLite consensus disorder prediction 53 73 - -
Mibi02g1328 281 CDD RING-H2_PA-TM-RING 96 139 - -
Mibi02g1328 281 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Mibi02g1328 281 SUPERFAMILY RING/U-box 91 155 - -
Mibi02g1328 281 SMART ring_2 97 138 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1328 Mibi-ChrMibi02 13108708 13109553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1328 17 274 C3H Transcription Factor Family AT3G03550 30.719 2.10e-23 96.3