Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1327 ATGTCGGTGCCTCCTTGGCTTGAGCCCCTCCTCACCACTTCCTTCTTCACTATCTGCCGCTTCCATGGCGACGCCGCCAGGAGCGAGTGTAATATGTTCTGTCTTGACTGCAATCGCGACGCATTCTGTTTCTATTGCCGTTCCTCCCGCCACAAGGATCATCAAGTCATTCAGATACGGCGATCTTCGTATCACGATGTGGTGAGAGTTTCTGAGATTCAGAAGGTGTTGGACATCAGTGGCGTTCAGACGTATGTGATAAACAGCGCCAGAGTGTTGTTCTTGAATGAGAGGCCTCAGCCTAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCTTTCCGCTTCTGTTCTTTGGGCTGTAAGCTTGTGGGAGTGAGGAGAAATGGGGACGCAAGCTTTGCTTTGGAGGGAAACAACAACAGTAACGAGGGAATATCAAGGAGATCAGTTTCAGTATCAGAAGAAGAATCGCGTGAAGGCTCACAACAAGACATGTATCCCGCCACGCCTCCTCCACCTGCTGCTTCAGCTTCATCCGCAAGAAGAAGAAAAGGCATTCCTCATAGGGCTCCTTTTGGCTCCTAA 612 0.4984 MSVPPWLEPLLTTSFFTICRFHGDAARSECNMFCLDCNRDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGVRRNGDASFALEGNNNSNEGISRRSVSVSEEESREGSQQDMYPATPPPPAASASSARRRKGIPHRAPFGS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1327 203 Pfam PLATZ transcription factor 60 131 IPR006734 -
Mibi02g1327 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 201 - -
Mibi02g1327 203 MobiDBLite consensus disorder prediction 142 203 - -
Mibi02g1327 203 SUPERFAMILY B-box zinc-binding domain 17 61 - -
Mibi02g1327 203 MobiDBLite consensus disorder prediction 142 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1327 Mibi-ChrMibi02 13103712 13104883 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mibi02g1327 PLATZ 9.5e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1327 02 13103712 13104883 Mibi06g2170 06 42162860 42164015 CCT
Mibi02g1327 02 13103712 13104883 Mibi02g1327 02 13103712 13104883 ECH