Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1304 ATGGCCTCCTGCAACGACGACGACGACGACGACTTCTCCCTCCTCAGTGACGATCATCCCCAATCTACCTACCCCCCACATTCCTTCTCCTCCGCCGTCACTCCCGTCGCCGACTCCGCCGAAGCCTATCGATTCGGCAACGATGCCGACAAGCGAAACGATCGGGATGACGCCGCCGGCGACGGCACTCCGTCGTACGGTTACAAGAGGCCCAAGGTTTCTAACGGCGGCGAGTATAGGAAGGATAGGGAGGAGTGGAGCGATGCGGCGATTGTTTGCCTTCTTGAGGCTTATACTGATAAGTTCACTCAGCTGAATCGAGGGAATCTTAGGGGCAGGGATTGGGAGGAGGTGGCCGCCATTGTTAGTGAGCGCTGTGAGAATCAGACCAAGAGCGTCGAGCAATGCAAGAATAAGGTCGATAATTTGAAGAAGAGGTATAAGTTGGAGAGGCATAGGATGAACAATGGTGGTATTTCTGCCAGTCATTGGCCTTGGTTCAAGCAGATGGAGCAGATCGTTGGTAATTCGTTATCTACAAAGTATGTGCAGGATGAAGACAAGGGGATCGCTTCTGGTGGGAATTCGCCCAGACAACCAAAAAGATATGGAGTCACAATGCCCAGCAGTGGAGGTCAGCTAAATAGCTTGAAGTCAAAACCGATGTCAAATGTTAGATGGCGAAGGGTAATCTTTAAAATTAGTGGAGCTGCTCTTACTGGATCTGCTACCTGCAACATTGACCCAAAGGTGGCCTTGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAATGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCTACTGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCTACTGTGATGAATTCTATATTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAAACTCGTGTACAAACTACCATTGCCATGCATGAATTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGCAGAGTTGTTATATTTGGTGGCATTGGCTTTGGCGCTGGAAATCCACTCTTTTCAACGGATACAGCTGCAGCTCTTCGAGCTTCTGAGATTCATGCTGAGGCTGTTCTCAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGGGATGGCAATTTCACTTTTGAGCACATATCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCTATGGATATGGCGGCACTGACATTCTGCGAAGAAAACGCCCTTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGTACACTAATTGACCAAACCGGATCCATAAGCTGA 1401 0.4854 MASCNDDDDDDFSLLSDDHPQSTYPPHSFSSAVTPVADSAEAYRFGNDADKRNDRDDAAGDGTPSYGYKRPKVSNGGEYRKDREEWSDAAIVCLLEAYTDKFTQLNRGNLRGRDWEEVAAIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMNNGGISASHWPWFKQMEQIVGNSLSTKYVQDEDKGIASGGNSPRQPKRYGVTMPSSGGQLNSLKSKPMSNVRWRRVIFKISGAALTGSATCNIDPKVALLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTTIAMHEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDTAAALRASEIHAEAVLKGTNVDGVYDCNSRDGNFTFEHISFRELVSRGATSMDMAALTFCEENALPVVVFNLLEPGNISKALCGEQVGTLIDQTGSIS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1304 466 Coils Coil 126 153 - -
Mibi02g1304 466 FunFam Uridylate kinase isoform A 219 465 - -
Mibi02g1304 466 Gene3D - 86 149 - -
Mibi02g1304 466 Pfam Myb/SANT-like DNA-binding domain 83 173 IPR044822 -
Mibi02g1304 466 CDD AAK_UMPK-PyrH-Ec 228 460 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mibi02g1304 466 MobiDBLite consensus disorder prediction 202 219 - -
Mibi02g1304 466 FunFam Aspartate/glutamate/uridylate kinase family protein 86 149 - -
Mibi02g1304 466 Pfam Amino acid kinase family 229 439 IPR001048 -
Mibi02g1304 466 MobiDBLite consensus disorder prediction 17 35 - -
Mibi02g1304 466 MobiDBLite consensus disorder prediction 44 59 - -
Mibi02g1304 466 MobiDBLite consensus disorder prediction 1 81 - -
Mibi02g1304 466 PANTHER URIDYLATE KINASE 79 465 - -
Mibi02g1304 466 Hamap Uridylate kinase [pyrH]. 225 460 IPR015963 GO:0005737|GO:0006221|GO:0033862
Mibi02g1304 466 Gene3D - 222 460 IPR036393 -
Mibi02g1304 466 MobiDBLite consensus disorder prediction 187 219 - -
Mibi02g1304 466 SUPERFAMILY Carbamate kinase-like 226 459 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1304 Mibi-ChrMibi02 12915561 12918868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1304 58 177 Trihelix Transcription Factor Family AT3G14180 40.164 4.26e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi02g1304 AA_kinase 1e-23 No_clan