Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1303 ATGAACAAGCCTTATTATGCATTGAACCTATCTTTCACCTTCTCCTTCATTTTAGCTTTCCTCTGTTTCAACACATATCTGTGTTCATCTCAGAATGACACCCAAGTTCTCACTCTGTTCCGCCTCCAAACCGACGCTCATGGCTATCTCCTCTCTAACTGGACCGGCGGCGACGCCTGTTCCGCCACGTGGCACGGCGTTTACTGCTCCTCCAACGGCCACGTCATGGCCGTCTCTCTCCCGTCCCTCAATCTCCGAGGACCCATTGACTCTCTCTCTTCGCTTTCACACCTCAGCCTCCTCGACCTCCATGATAACCGTTTAAACGGAACCATTGCTCCTCTCTCTAACTGTACTCGCCTCAGGCTACTTTACCTCTCTCACAACGACTTCTCCGGCGAGATTCCTCCGTCAATAGCTTCTCTCAAGCATCTCCTCAGGCTTGACCTTTCTGACAACAACATTAAGGGCACAATTCCCAACGAAATCTCTTCGTTAACTCACCTTCTCACTCTTCGCCTACAGAACAATGTGCTCTCTGGGCAAGTCCCAGATCTCTCTGGTTCGCTTGTTAATCTCACAGAGCTCAATTTCACTAACAACGAGCTGTACGGACGATTACCTGATGCAATGTTAAAGAAATTCGGAGACAAAACCTTCTCCGGGAATGAAGGATTGTGTGGATCAACGCCATTTCCTGTTTGTTCCTTCACAGGGAAAAGCCCTCCTTCTTCTGCATCACCGCCTCCGCAGATAGTTCCTTCGAATCCAAGTTCGTTGCCGGAATCTCAAACAAGCGTGATCGTCAAACCCAAAGCCCAACATCGAAAGGGGTTAAGCCCAGGAGCTATAGTAGCCATAGTGGTGGCGAACTGTGTTGCATTGTTGGTTGTAACTTCTTTCATCGTGGCTCACTGTTGCGCAAGAGGACAAAGCGAGAGCTCGATGGTGGGCAGTGAAAATGGGAAGAGAAAAAGTGGGAGTAGTGGCTCTGGAAGCGAGAAAAAGGGGTACGTAAATAATGGTGGAGGAGATAGTGATGGGACTAGCGGTACAGATCGAAGCAGGCTTGTGTTTTTTGATCGGAGGAATCAATTTGAGCTTGAGGAATTGCTGAGAGCATCGGCGGAGATGCTTGGAAAAGGAAGCTTGGGGACGGTTTACAAGGCGGCGCTTGATGATGGTTCTTCTGTGGCGGTTAAGAGGCTTAAGGACGCAAATCCATGCGCCAGGAATGAGTTCGAGCAGTACATGGAAATCATCGGGAAGATCAAGCACCCCAATATTGTCAGATTCAGAGCATATTACTACGCCAAAGAAGAAAAACTTCTCGTCTATGACTATCTCCCCAATGGAAGCTTGCATTCTCTTCTTCACGGAAATCGAGGACCAGGAAGAATTCCACTAGATTGGACCACAAGAGTGAGCTTGGTGTTAGGAGCAGCAAGAGGACTAGCTCGTATCCATGCAGAATACAATGCAGCAAAAATCCCTCACGGAAACGTAAAATCTTCGAATGTGCTTCTTGACAAGAACGGCGTCGCTTGCGTTTCCGACTTTGGATTGTCCCTATTACTGAATCCTGCTCACGCCATTGCAAGATTGGGAGGTTACAGAGCTCCAGAACAAGAACAAGTGAAGAGGCTGTCTCAGCAGGCAGACGTATACAGCTTTGGAGTTTTACTGCTTGAGGTTCTCACAGGGAGAGCTCCGTTGCAGCACCCTTCGCCGGCTCGGCCTCGCGCCGGCGAAGATGAACAAGACGAGGATCTTCCGAAATGGGTTCGATCTGTTGTGAAGGAAGAGTGGACGGCGGAAGTGTTTGATCAAGAACTGTTGCGTTATAAGAACATAGAGGAAGAGCTCGTTTCAATGCTGCATGTGGGGTTGGCTTGTGTGGCTTCTCAGCCAGAGAATAGGCCAACCATGGCTGAAGTAGTTAAGATGATTGAGGAGATAAGAGTGGAACAATCTCCATTAGCAGAGGACTATGATGAATCGCGTAATTCACTTTCACCATCACTTGCCACCACTGAAGATGGCCTTCCTTGA 2052 0.4868 MNKPYYALNLSFTFSFILAFLCFNTYLCSSQNDTQVLTLFRLQTDAHGYLLSNWTGGDACSATWHGVYCSSNGHVMAVSLPSLNLRGPIDSLSSLSHLSLLDLHDNRLNGTIAPLSNCTRLRLLYLSHNDFSGEIPPSIASLKHLLRLDLSDNNIKGTIPNEISSLTHLLTLRLQNNVLSGQVPDLSGSLVNLTELNFTNNELYGRLPDAMLKKFGDKTFSGNEGLCGSTPFPVCSFTGKSPPSSASPPPQIVPSNPSSLPESQTSVIVKPKAQHRKGLSPGAIVAIVVANCVALLVVTSFIVAHCCARGQSESSMVGSENGKRKSGSSGSGSEKKGYVNNGGGDSDGTSGTDRSRLVFFDRRNQFELEELLRASAEMLGKGSLGTVYKAALDDGSSVAVKRLKDANPCARNEFEQYMEIIGKIKHPNIVRFRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRVSLVLGAARGLARIHAEYNAAKIPHGNVKSSNVLLDKNGVACVSDFGLSLLLNPAHAIARLGGYRAPEQEQVKRLSQQADVYSFGVLLLEVLTGRAPLQHPSPARPRAGEDEQDEDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVASQPENRPTMAEVVKMIEEIRVEQSPLAEDYDESRNSLSPSLATTEDGLP 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1303 683 Pfam Protein kinase domain 377 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1303 683 MobiDBLite consensus disorder prediction 658 683 - -
Mibi02g1303 683 MobiDBLite consensus disorder prediction 313 336 - -
Mibi02g1303 683 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mibi02g1303 683 SUPERFAMILY Protein kinase-like (PK-like) 377 651 IPR011009 -
Mibi02g1303 683 Gene3D Ribonuclease Inhibitor 32 140 IPR032675 -
Mibi02g1303 683 Gene3D Phosphorylase Kinase; domain 1 349 448 - -
Mibi02g1303 683 FunFam pollen receptor-like kinase 1 344 448 - -
Mibi02g1303 683 FunFam Nuclear pore complex protein NUP107 30 185 - -
Mibi02g1303 683 Gene3D Transferase(Phosphotransferase) domain 1 449 673 - -
Mibi02g1303 683 ProSiteProfiles Protein kinase domain profile. 373 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1303 683 SUPERFAMILY L domain-like 31 212 - -
Mibi02g1303 683 Gene3D Ribonuclease Inhibitor 141 240 IPR032675 -
Mibi02g1303 683 MobiDBLite consensus disorder prediction 239 273 - -
Mibi02g1303 683 MobiDBLite consensus disorder prediction 313 354 - -
Mibi02g1303 683 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 449 663 - -
Mibi02g1303 683 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 655 - -
Mibi02g1303 683 CDD STKc_IRAK 379 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1303 Mibi-ChrMibi02 12912432 12914754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1303 30 679 Receptor kinase-like Gene Family AT2G36570 67.678 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi02g1303 Pkinase 1.9e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1303 02 12912432 12914754 Mibi06g2152 06 41989930 41992379 CCT